Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CCL3L1P16619 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CCL3L1P16619 AL512343.1-201ENST00000605837 169 ntBASIC12.38□□□□□ -0.43
CCL3L1P16619 WNT11-204ENST00000621122 789 ntTSL 5 BASIC12.38□□□□□ -0.43
CCL3L1P16619 AC132938.4-201ENST00000623835 848 ntBASIC12.38□□□□□ -0.43
CCL3L1P16619 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
CCL3L1P16619 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.38□□□□□ -0.43
CCL3L1P16619 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
CCL3L1P16619 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL3L1P16619 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CCL3L1P16619 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.38□□□□□ -0.43
CCL3L1P16619 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
CCL3L1P16619 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC12.37□□□□□ -0.43
CCL3L1P16619 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL3L1P16619 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL3L1P16619 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL3L1P16619 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.37□□□□□ -0.43
CCL3L1P16619 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
CCL3L1P16619 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCL3L1P16619 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCL3L1P16619 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
CCL3L1P16619 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCL3L1P16619 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
CCL3L1P16619 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
CCL3L1P16619 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.37□□□□□ -0.43
CCL3L1P16619 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
CCL3L1P16619 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CCL3L1P16619 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL3L1P16619 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL3L1P16619 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL3L1P16619 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL3L1P16619 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.37□□□□□ -0.43
CCL3L1P16619 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.37□□□□□ -0.43
CCL3L1P16619 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL3L1P16619 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCL3L1P16619 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
CCL3L1P16619 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.37□□□□□ -0.43
CCL3L1P16619 GPR53P-205ENST00000457298 1084 ntBASIC12.37□□□□□ -0.43
CCL3L1P16619 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.37□□□□□ -0.43
CCL3L1P16619 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC12.37□□□□□ -0.43
CCL3L1P16619 RNA5SP486-201ENST00000515961 83 ntBASIC12.37□□□□□ -0.43
CCL3L1P16619 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC12.37□□□□□ -0.43
CCL3L1P16619 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC12.37□□□□□ -0.43
CCL3L1P16619 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CCL3L1P16619 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC12.37□□□□□ -0.43
CCL3L1P16619 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.37□□□□□ -0.43
CCL3L1P16619 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.37□□□□□ -0.43
CCL3L1P16619 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCL3L1P16619 PFAS-212ENST00000625942 396 ntTSL 5 BASIC12.37□□□□□ -0.43
CCL3L1P16619 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.37□□□□□ -0.43
CCL3L1P16619 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL3L1P16619 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCL3L1P16619 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CCL3L1P16619 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCL3L1P16619 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL3L1P16619 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCL3L1P16619 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL3L1P16619 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL3L1P16619 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.37□□□□□ -0.43
CCL3L1P16619 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
CCL3L1P16619 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCL3L1P16619 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL3L1P16619 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
CCL3L1P16619 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL3L1P16619 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
CCL3L1P16619 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.37□□□□□ -0.43
CCL3L1P16619 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCL3L1P16619 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL3L1P16619 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.37□□□□□ -0.43
CCL3L1P16619 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL3L1P16619 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCL3L1P16619 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL3L1P16619 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL3L1P16619 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.37□□□□□ -0.43
CCL3L1P16619 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.37□□□□□ -0.43
CCL3L1P16619 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.37□□□□□ -0.43
CCL3L1P16619 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
CCL3L1P16619 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CCL3L1P16619 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCL3L1P16619 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCL3L1P16619 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCL3L1P16619 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCL3L1P16619 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.36□□□□□ -0.43
CCL3L1P16619 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CCL3L1P16619 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCL3L1P16619 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.36□□□□□ -0.43
CCL3L1P16619 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms