Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CDH1P12830 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.07
CDH1P12830 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CDH1P12830 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CDH1P12830 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDH1P12830 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.64□□□□□ -0.07
CDH1P12830 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
CDH1P12830 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH1P12830 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH1P12830 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDH1P12830 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH1P12830 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH1P12830 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CDH1P12830 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDH1P12830 AL122018.1-201ENST00000446607 2310 ntBASIC14.64□□□□□ -0.07
CDH1P12830 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH1P12830 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH1P12830 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CDH1P12830 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH1P12830 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH1P12830 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CDH1P12830 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CDH1P12830 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.64□□□□□ -0.07
CDH1P12830 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDH1P12830 COX20P2-201ENST00000452636 358 ntBASIC14.64□□□□□ -0.07
CDH1P12830 AC022137.2-201ENST00000503482 481 ntBASIC14.64□□□□□ -0.07
CDH1P12830 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.64□□□□□ -0.07
CDH1P12830 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.64□□□□□ -0.07
CDH1P12830 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH1P12830 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.64□□□□□ -0.07
CDH1P12830 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.64□□□□□ -0.07
CDH1P12830 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH1P12830 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH1P12830 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH1P12830 AL358472.5-202ENST00000641448 1267 ntBASIC14.64□□□□□ -0.07
CDH1P12830 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDH1P12830 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH1P12830 LRRC59-203ENST00000576448 1531 ntBASIC14.64□□□□□ -0.07
CDH1P12830 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CDH1P12830 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH1P12830 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CDH1P12830 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH1P12830 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH1P12830 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDH1P12830 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH1P12830 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH1P12830 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.64□□□□□ -0.07
CDH1P12830 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH1P12830 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH1P12830 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH1P12830 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH1P12830 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH1P12830 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDH1P12830 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.64□□□□□ -0.07
CDH1P12830 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.64□□□□□ -0.07
CDH1P12830 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDH1P12830 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH1P12830 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH1P12830 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH1P12830 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CDH1P12830 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH1P12830 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH1P12830 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CDH1P12830 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH1P12830 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH1P12830 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH1P12830 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
CDH1P12830 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CDH1P12830 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.63□□□□□ -0.07
CDH1P12830 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.63□□□□□ -0.07
CDH1P12830 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CDH1P12830 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH1P12830 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH1P12830 AC136759.1-202ENST00000530858 2194 ntBASIC14.63□□□□□ -0.07
CDH1P12830 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH1P12830 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH1P12830 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.63□□□□□ -0.07
CDH1P12830 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH1P12830 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH1P12830 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH1P12830 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH1P12830 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH1P12830 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.63□□□□□ -0.07
CDH1P12830 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH1P12830 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.63□□□□□ -0.07
CDH1P12830 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
CDH1P12830 ACTG1P3-201ENST00000431775 1114 ntBASIC14.63□□□□□ -0.07
CDH1P12830 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.63□□□□□ -0.07
CDH1P12830 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH1P12830 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.63□□□□□ -0.07
CDH1P12830 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.63□□□□□ -0.07
CDH1P12830 AC022616.1-201ENST00000518688 554 ntBASIC14.63□□□□□ -0.07
CDH1P12830 PTP4A1P2-201ENST00000546033 454 ntBASIC14.63□□□□□ -0.07
CDH1P12830 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.63□□□□□ -0.07
CDH1P12830 LINC02084-201ENST00000606069 1096 ntBASIC14.63□□□□□ -0.07
CDH1P12830 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.63□□□□□ -0.07
CDH1P12830 AC105233.6-201ENST00000642093 218 ntBASIC14.63□□□□□ -0.07
CDH1P12830 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH1P12830 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.63□□□□□ -0.07
CDH1P12830 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms