Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.94□□□□□ -0.18
UBL4AP11441 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UBL4AP11441 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBL4AP11441 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.94□□□□□ -0.18
UBL4AP11441 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.94□□□□□ -0.18
UBL4AP11441 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBL4AP11441 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
UBL4AP11441 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
UBL4AP11441 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UBL4AP11441 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBL4AP11441 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBL4AP11441 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBL4AP11441 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBL4AP11441 AL139094.1-201ENST00000405549 1188 ntBASIC13.94□□□□□ -0.18
UBL4AP11441 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UBL4AP11441 CRB3P1-201ENST00000449338 276 ntBASIC13.94□□□□□ -0.18
UBL4AP11441 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.94□□□□□ -0.18
UBL4AP11441 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.94□□□□□ -0.18
UBL4AP11441 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UBL4AP11441 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
UBL4AP11441 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBL4AP11441 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UBL4AP11441 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UBL4AP11441 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
UBL4AP11441 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBL4AP11441 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.94□□□□□ -0.18
UBL4AP11441 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
UBL4AP11441 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.94□□□□□ -0.18
UBL4AP11441 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
UBL4AP11441 WFDC1-204ENST00000613603 549 ntBASIC13.94□□□□□ -0.18
UBL4AP11441 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.94□□□□□ -0.18
UBL4AP11441 CU634019.7-201ENST00000624153 1185 ntBASIC13.94□□□□□ -0.18
UBL4AP11441 FP236241.2-201ENST00000624906 1185 ntBASIC13.94□□□□□ -0.18
UBL4AP11441 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.94□□□□□ -0.18
UBL4AP11441 PRSS30P-206ENST00000641773 873 ntBASIC13.94□□□□□ -0.18
UBL4AP11441 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBL4AP11441 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBL4AP11441 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
UBL4AP11441 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBL4AP11441 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.94□□□□□ -0.18
UBL4AP11441 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBL4AP11441 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBL4AP11441 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
UBL4AP11441 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBL4AP11441 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBL4AP11441 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBL4AP11441 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBL4AP11441 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBL4AP11441 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBL4AP11441 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBL4AP11441 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBL4AP11441 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBL4AP11441 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
UBL4AP11441 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UBL4AP11441 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBL4AP11441 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UBL4AP11441 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBL4AP11441 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.93□□□□□ -0.18
UBL4AP11441 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
UBL4AP11441 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UBL4AP11441 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBL4AP11441 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBL4AP11441 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
UBL4AP11441 AL137783.1-201ENST00000623494 1896 ntBASIC13.93□□□□□ -0.18
UBL4AP11441 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.93□□□□□ -0.18
UBL4AP11441 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBL4AP11441 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.93□□□□□ -0.18
UBL4AP11441 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
UBL4AP11441 KRT8P14-201ENST00000414254 1442 ntBASIC13.93□□□□□ -0.18
UBL4AP11441 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBL4AP11441 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBL4AP11441 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBL4AP11441 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
UBL4AP11441 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.93□□□□□ -0.18
UBL4AP11441 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
UBL4AP11441 RNU1-114P-201ENST00000365297 166 ntBASIC13.93□□□□□ -0.18
UBL4AP11441 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UBL4AP11441 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
UBL4AP11441 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBL4AP11441 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.93□□□□□ -0.18
UBL4AP11441 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UBL4AP11441 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.93□□□□□ -0.18
UBL4AP11441 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.93□□□□□ -0.18
UBL4AP11441 AC005252.2-201ENST00000624630 1141 ntBASIC13.93□□□□□ -0.18
UBL4AP11441 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.93□□□□□ -0.18
UBL4AP11441 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.93□□□□□ -0.18
UBL4AP11441 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
UBL4AP11441 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBL4AP11441 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
UBL4AP11441 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.93□□□□□ -0.18
UBL4AP11441 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.93□□□□□ -0.18
UBL4AP11441 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.93□□□□□ -0.18
UBL4AP11441 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.93□□□□□ -0.18
UBL4AP11441 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
UBL4AP11441 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UBL4AP11441 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBL4AP11441 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.93□□□□□ -0.18
UBL4AP11441 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
UBL4AP11441 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
UBL4AP11441 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms