Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RARAP10276 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RARAP10276 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.73■□□□□ 0.11
RARAP10276 AC092135.3-201ENST00000624151 1846 ntBASIC15.73■□□□□ 0.11
RARAP10276 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
RARAP10276 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RARAP10276 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RARAP10276 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RARAP10276 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.73■□□□□ 0.11
RARAP10276 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.73■□□□□ 0.11
RARAP10276 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RARAP10276 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.73■□□□□ 0.11
RARAP10276 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RARAP10276 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.73■□□□□ 0.11
RARAP10276 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RARAP10276 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RARAP10276 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RARAP10276 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
RARAP10276 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RARAP10276 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.73■□□□□ 0.11
RARAP10276 TERF1P3-201ENST00000505638 1227 ntBASIC15.73■□□□□ 0.11
RARAP10276 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.73■□□□□ 0.11
RARAP10276 AC022616.1-201ENST00000518688 554 ntBASIC15.73■□□□□ 0.11
RARAP10276 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.73■□□□□ 0.11
RARAP10276 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.73■□□□□ 0.11
RARAP10276 TP53TG3HP-202ENST00000569755 579 ntBASIC15.73■□□□□ 0.11
RARAP10276 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.73■□□□□ 0.11
RARAP10276 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.73■□□□□ 0.11
RARAP10276 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.73■□□□□ 0.11
RARAP10276 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RARAP10276 AP005019.2-201ENST00000615104 511 ntBASIC15.73■□□□□ 0.11
RARAP10276 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.73■□□□□ 0.11
RARAP10276 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RARAP10276 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RARAP10276 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RARAP10276 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.73■□□□□ 0.11
RARAP10276 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
RARAP10276 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RARAP10276 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RARAP10276 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RARAP10276 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RARAP10276 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
RARAP10276 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RARAP10276 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RARAP10276 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
RARAP10276 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.73■□□□□ 0.11
RARAP10276 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RARAP10276 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RARAP10276 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RARAP10276 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RARAP10276 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
RARAP10276 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RARAP10276 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.72■□□□□ 0.11
RARAP10276 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RARAP10276 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RARAP10276 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RARAP10276 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.72■□□□□ 0.11
RARAP10276 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RARAP10276 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RARAP10276 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RARAP10276 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC15.72■□□□□ 0.11
RARAP10276 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RARAP10276 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.72■□□□□ 0.11
RARAP10276 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RARAP10276 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RARAP10276 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RARAP10276 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RARAP10276 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.72■□□□□ 0.11
RARAP10276 DGCR5-201ENST00000399539 862 ntBASIC15.72■□□□□ 0.11
RARAP10276 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.72■□□□□ 0.11
RARAP10276 EIF3FP3-201ENST00000434851 1086 ntBASIC15.72■□□□□ 0.11
RARAP10276 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.72■□□□□ 0.11
RARAP10276 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.72■□□□□ 0.11
RARAP10276 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RARAP10276 AC026434.2-201ENST00000506094 1078 ntBASIC15.72■□□□□ 0.11
RARAP10276 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RARAP10276 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.72■□□□□ 0.11
RARAP10276 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RARAP10276 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.72■□□□□ 0.11
RARAP10276 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RARAP10276 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.72■□□□□ 0.11
RARAP10276 AL359183.1-201ENST00000623796 2132 ntBASIC15.72■□□□□ 0.11
RARAP10276 CU634019.7-201ENST00000624153 1185 ntBASIC15.72■□□□□ 0.11
RARAP10276 FP236241.2-201ENST00000624906 1185 ntBASIC15.72■□□□□ 0.11
RARAP10276 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RARAP10276 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RARAP10276 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RARAP10276 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RARAP10276 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RARAP10276 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.72■□□□□ 0.11
RARAP10276 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RARAP10276 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.72■□□□□ 0.11
RARAP10276 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.72■□□□□ 0.11
RARAP10276 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RARAP10276 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RARAP10276 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.72■□□□□ 0.11
RARAP10276 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RARAP10276 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RARAP10276 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RARAP10276 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms