Protein–RNA interactions for Protein: P0DP25

CALM3, Calmodulin-3, humanhuman

Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3P0DP25 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.33■□□□□ 0.37
CALM3P0DP25 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
CALM3P0DP25 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.33■□□□□ 0.37
CALM3P0DP25 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.33■□□□□ 0.37
CALM3P0DP25 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CALM3P0DP25 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CALM3P0DP25 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CALM3P0DP25 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.33■□□□□ 0.37
CALM3P0DP25 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.33■□□□□ 0.36
CALM3P0DP25 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CALM3P0DP25 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CALM3P0DP25 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CALM3P0DP25 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CALM3P0DP25 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CALM3P0DP25 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.33■□□□□ 0.36
CALM3P0DP25 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CALM3P0DP25 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CALM3P0DP25 PUDPP3-201ENST00000445368 636 ntBASIC17.33■□□□□ 0.36
CALM3P0DP25 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CALM3P0DP25 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.33■□□□□ 0.36
CALM3P0DP25 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.33■□□□□ 0.36
CALM3P0DP25 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.33■□□□□ 0.36
CALM3P0DP25 MIR4683-201ENST00000579659 81 ntBASIC17.33■□□□□ 0.36
CALM3P0DP25 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.33■□□□□ 0.36
CALM3P0DP25 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CALM3P0DP25 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.33■□□□□ 0.36
CALM3P0DP25 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CALM3P0DP25 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CALM3P0DP25 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CALM3P0DP25 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CALM3P0DP25 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CALM3P0DP25 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CALM3P0DP25 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CALM3P0DP25 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CALM3P0DP25 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CALM3P0DP25 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CALM3P0DP25 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CALM3P0DP25 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.32■□□□□ 0.36
CALM3P0DP25 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.32■□□□□ 0.36
CALM3P0DP25 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.32■□□□□ 0.36
CALM3P0DP25 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CALM3P0DP25 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CALM3P0DP25 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CALM3P0DP25 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC17.32■□□□□ 0.36
CALM3P0DP25 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CALM3P0DP25 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CALM3P0DP25 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.32■□□□□ 0.36
CALM3P0DP25 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CALM3P0DP25 AL354702.1-201ENST00000442006 1960 ntBASIC17.32■□□□□ 0.36
CALM3P0DP25 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CALM3P0DP25 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CALM3P0DP25 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CALM3P0DP25 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CALM3P0DP25 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CALM3P0DP25 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CALM3P0DP25 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CALM3P0DP25 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.32■□□□□ 0.36
CALM3P0DP25 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.32■□□□□ 0.36
CALM3P0DP25 AP006547.1-201ENST00000563435 692 ntBASIC17.32■□□□□ 0.36
CALM3P0DP25 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.32■□□□□ 0.36
CALM3P0DP25 AL359881.2-201ENST00000602973 570 ntBASIC17.32■□□□□ 0.36
CALM3P0DP25 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.32■□□□□ 0.36
CALM3P0DP25 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CALM3P0DP25 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CALM3P0DP25 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CALM3P0DP25 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CALM3P0DP25 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CALM3P0DP25 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CALM3P0DP25 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CALM3P0DP25 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC17.32■□□□□ 0.36
CALM3P0DP25 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CALM3P0DP25 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CALM3P0DP25 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CALM3P0DP25 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.32■□□□□ 0.36
CALM3P0DP25 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC17.32■□□□□ 0.36
CALM3P0DP25 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.32■□□□□ 0.36
CALM3P0DP25 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.32■□□□□ 0.36
CALM3P0DP25 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.31■□□□□ 0.36
CALM3P0DP25 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CALM3P0DP25 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CALM3P0DP25 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CALM3P0DP25 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CALM3P0DP25 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CALM3P0DP25 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CALM3P0DP25 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CALM3P0DP25 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CALM3P0DP25 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CALM3P0DP25 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.31■□□□□ 0.36
CALM3P0DP25 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.31■□□□□ 0.36
CALM3P0DP25 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.31■□□□□ 0.36
CALM3P0DP25 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.31■□□□□ 0.36
CALM3P0DP25 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.31■□□□□ 0.36
CALM3P0DP25 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CALM3P0DP25 AL358472.3-201ENST00000608147 415 ntBASIC17.31■□□□□ 0.36
CALM3P0DP25 AP001002.3-201ENST00000623482 206 ntBASIC17.31■□□□□ 0.36
CALM3P0DP25 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.31■□□□□ 0.36
CALM3P0DP25 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CALM3P0DP25 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CALM3P0DP25 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.31■□□□□ 0.36
CALM3P0DP25 AC099063.4-201ENST00000641099 1602 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms