Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AC036164.1-201ENST00000570544 333 ntBASIC13.21□□□□□ -0.29
UBCP0CG48 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.21□□□□□ -0.29
UBCP0CG48 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.21□□□□□ -0.29
UBCP0CG48 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
UBCP0CG48 AC079781.4-201ENST00000641908 219 ntBASIC13.21□□□□□ -0.29
UBCP0CG48 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.21□□□□□ -0.29
UBCP0CG48 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBCP0CG48 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
UBCP0CG48 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.21□□□□□ -0.29
UBCP0CG48 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
UBCP0CG48 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBCP0CG48 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.21□□□□□ -0.29
UBCP0CG48 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
UBCP0CG48 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
UBCP0CG48 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.21□□□□□ -0.3
UBCP0CG48 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
UBCP0CG48 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.21□□□□□ -0.3
UBCP0CG48 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
UBCP0CG48 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
UBCP0CG48 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
UBCP0CG48 AC100757.3-201ENST00000622361 1406 ntBASIC13.21□□□□□ -0.3
UBCP0CG48 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
UBCP0CG48 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
UBCP0CG48 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
UBCP0CG48 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
UBCP0CG48 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
UBCP0CG48 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBCP0CG48 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBCP0CG48 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.2□□□□□ -0.3
UBCP0CG48 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
UBCP0CG48 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UBCP0CG48 AC152010.1-201ENST00000415779 2006 ntBASIC13.2□□□□□ -0.3
UBCP0CG48 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBCP0CG48 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBCP0CG48 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.2□□□□□ -0.3
UBCP0CG48 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBCP0CG48 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
UBCP0CG48 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBCP0CG48 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UBCP0CG48 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.2□□□□□ -0.3
UBCP0CG48 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.2□□□□□ -0.3
UBCP0CG48 CICP8-201ENST00000455800 2813 ntBASIC13.2□□□□□ -0.3
UBCP0CG48 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBCP0CG48 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.2□□□□□ -0.3
UBCP0CG48 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBCP0CG48 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.2□□□□□ -0.3
UBCP0CG48 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.2□□□□□ -0.3
UBCP0CG48 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.2□□□□□ -0.3
UBCP0CG48 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.2□□□□□ -0.3
UBCP0CG48 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.2□□□□□ -0.3
UBCP0CG48 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBCP0CG48 FAM86GP-201ENST00000448322 971 ntBASIC13.2□□□□□ -0.3
UBCP0CG48 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.2□□□□□ -0.3
UBCP0CG48 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBCP0CG48 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBCP0CG48 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.2□□□□□ -0.3
UBCP0CG48 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.2□□□□□ -0.3
UBCP0CG48 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UBCP0CG48 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBCP0CG48 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
UBCP0CG48 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBCP0CG48 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBCP0CG48 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.2□□□□□ -0.3
UBCP0CG48 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
UBCP0CG48 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.2□□□□□ -0.3
UBCP0CG48 AL137783.1-201ENST00000623494 1896 ntBASIC13.2□□□□□ -0.3
UBCP0CG48 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.2□□□□□ -0.3
UBCP0CG48 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.2□□□□□ -0.3
UBCP0CG48 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBCP0CG48 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBCP0CG48 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
UBCP0CG48 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UBCP0CG48 AL158070.2-201ENST00000623713 1621 ntBASIC13.2□□□□□ -0.3
UBCP0CG48 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.2□□□□□ -0.3
UBCP0CG48 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UBCP0CG48 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UBCP0CG48 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
UBCP0CG48 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.2□□□□□ -0.3
UBCP0CG48 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UBCP0CG48 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBCP0CG48 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
UBCP0CG48 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBCP0CG48 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.19□□□□□ -0.3
UBCP0CG48 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBCP0CG48 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBCP0CG48 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
UBCP0CG48 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UBCP0CG48 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.19□□□□□ -0.3
UBCP0CG48 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBCP0CG48 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBCP0CG48 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBCP0CG48 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBCP0CG48 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBCP0CG48 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBCP0CG48 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.19□□□□□ -0.3
UBCP0CG48 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBCP0CG48 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBCP0CG48 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UBCP0CG48 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.19□□□□□ -0.3
UBCP0CG48 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms