Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC172P0C7W6 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC172P0C7W6 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC172P0C7W6 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC172P0C7W6 VDAC1P7-201ENST00000462417 847 ntBASIC16.28■□□□□ 0.2
CCDC172P0C7W6 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC172P0C7W6 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC172P0C7W6 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.28■□□□□ 0.2
CCDC172P0C7W6 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC172P0C7W6 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CCDC172P0C7W6 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC172P0C7W6 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC172P0C7W6 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC172P0C7W6 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC172P0C7W6 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCDC172P0C7W6 AL137783.1-201ENST00000623494 1896 ntBASIC16.28■□□□□ 0.2
CCDC172P0C7W6 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC172P0C7W6 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC172P0C7W6 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
CCDC172P0C7W6 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC172P0C7W6 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC172P0C7W6 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC172P0C7W6 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC172P0C7W6 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC172P0C7W6 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC172P0C7W6 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CCDC172P0C7W6 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC172P0C7W6 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC172P0C7W6 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
CCDC172P0C7W6 OS9-207ENST00000439210 1946 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC172P0C7W6 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC172P0C7W6 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC172P0C7W6 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CCDC172P0C7W6 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC172P0C7W6 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC172P0C7W6 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC172P0C7W6 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC172P0C7W6 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC172P0C7W6 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC172P0C7W6 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CCDC172P0C7W6 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.27■□□□□ 0.2
CCDC172P0C7W6 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.27■□□□□ 0.2
CCDC172P0C7W6 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC172P0C7W6 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC172P0C7W6 HLA-K-203ENST00000430151 1046 ntBASIC16.27■□□□□ 0.2
CCDC172P0C7W6 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC172P0C7W6 AC093004.1-201ENST00000508850 424 ntBASIC16.27■□□□□ 0.2
CCDC172P0C7W6 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.27■□□□□ 0.2
CCDC172P0C7W6 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC172P0C7W6 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.27■□□□□ 0.2
CCDC172P0C7W6 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.27■□□□□ 0.2
CCDC172P0C7W6 AL390955.2-201ENST00000603032 514 ntBASIC16.27■□□□□ 0.2
CCDC172P0C7W6 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC172P0C7W6 AL603764.1-201ENST00000636452 321 ntBASIC16.27■□□□□ 0.2
CCDC172P0C7W6 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC172P0C7W6 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.27■□□□□ 0.2
CCDC172P0C7W6 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC172P0C7W6 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC172P0C7W6 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CCDC172P0C7W6 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC172P0C7W6 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.27■□□□□ 0.19
CCDC172P0C7W6 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC172P0C7W6 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CCDC172P0C7W6 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC172P0C7W6 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.27■□□□□ 0.19
CCDC172P0C7W6 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CCDC172P0C7W6 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC172P0C7W6 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC172P0C7W6 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC172P0C7W6 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
CCDC172P0C7W6 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 SPDYE19P-201ENST00000338590 713 ntBASIC16.26■□□□□ 0.19
CCDC172P0C7W6 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 AC134915.1-201ENST00000426461 574 ntBASIC16.26■□□□□ 0.19
CCDC172P0C7W6 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 AC023310.3-201ENST00000557027 670 ntBASIC16.26■□□□□ 0.19
CCDC172P0C7W6 AC100756.1-201ENST00000562736 682 ntBASIC16.26■□□□□ 0.19
CCDC172P0C7W6 AC138749.3-201ENST00000567691 622 ntBASIC16.26■□□□□ 0.19
CCDC172P0C7W6 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.26■□□□□ 0.19
CCDC172P0C7W6 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms