Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLTAP09496 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
CLTAP09496 AC023310.1-201ENST00000554836 735 ntBASIC16.43■□□□□ 0.22
CLTAP09496 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CLTAP09496 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLTAP09496 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.43■□□□□ 0.22
CLTAP09496 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.43■□□□□ 0.22
CLTAP09496 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CLTAP09496 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLTAP09496 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLTAP09496 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
CLTAP09496 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CLTAP09496 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLTAP09496 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLTAP09496 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLTAP09496 AHCYP2-201ENST00000430630 1300 ntBASIC16.43■□□□□ 0.22
CLTAP09496 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.43■□□□□ 0.22
CLTAP09496 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLTAP09496 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLTAP09496 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLTAP09496 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLTAP09496 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLTAP09496 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLTAP09496 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.42■□□□□ 0.22
CLTAP09496 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLTAP09496 ACE3P-201ENST00000423435 1973 ntBASIC16.42■□□□□ 0.22
CLTAP09496 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLTAP09496 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.42■□□□□ 0.22
CLTAP09496 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLTAP09496 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CLTAP09496 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
CLTAP09496 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLTAP09496 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CLTAP09496 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.42■□□□□ 0.22
CLTAP09496 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.42■□□□□ 0.22
CLTAP09496 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLTAP09496 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLTAP09496 BNIP3P42-201ENST00000454982 569 ntBASIC16.42■□□□□ 0.22
CLTAP09496 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLTAP09496 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.42■□□□□ 0.22
CLTAP09496 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.42■□□□□ 0.22
CLTAP09496 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.42■□□□□ 0.22
CLTAP09496 BNIP3P29-201ENST00000598302 571 ntBASIC16.42■□□□□ 0.22
CLTAP09496 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.42■□□□□ 0.22
CLTAP09496 AC011447.5-201ENST00000616168 564 ntBASIC16.42■□□□□ 0.22
CLTAP09496 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.42■□□□□ 0.22
CLTAP09496 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLTAP09496 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLTAP09496 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLTAP09496 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLTAP09496 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLTAP09496 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.42■□□□□ 0.22
CLTAP09496 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLTAP09496 AC005089.1-201ENST00000619486 2241 ntBASIC16.42■□□□□ 0.22
CLTAP09496 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLTAP09496 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CLTAP09496 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC16.42■□□□□ 0.22
CLTAP09496 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLTAP09496 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CLTAP09496 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.42■□□□□ 0.22
CLTAP09496 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLTAP09496 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLTAP09496 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CLTAP09496 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CLTAP09496 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLTAP09496 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.41■□□□□ 0.22
CLTAP09496 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.41■□□□□ 0.22
CLTAP09496 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLTAP09496 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CLTAP09496 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLTAP09496 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLTAP09496 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLTAP09496 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLTAP09496 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLTAP09496 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLTAP09496 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLTAP09496 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLTAP09496 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLTAP09496 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.41■□□□□ 0.22
CLTAP09496 MIR1202-201ENST00000408529 83 ntBASIC16.41■□□□□ 0.22
CLTAP09496 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CLTAP09496 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.41■□□□□ 0.22
CLTAP09496 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.41■□□□□ 0.22
CLTAP09496 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.41■□□□□ 0.22
CLTAP09496 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CLTAP09496 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLTAP09496 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.41■□□□□ 0.22
CLTAP09496 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.41■□□□□ 0.22
CLTAP09496 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLTAP09496 AC004466.1-201ENST00000599515 1080 ntBASIC16.41■□□□□ 0.22
CLTAP09496 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CLTAP09496 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.41■□□□□ 0.22
CLTAP09496 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
CLTAP09496 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLTAP09496 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLTAP09496 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLTAP09496 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLTAP09496 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLTAP09496 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.41■□□□□ 0.22
CLTAP09496 PCDHA3-202ENST00000532566 4594 ntBASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms