Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RETP07949 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RETP07949 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RETP07949 CICP24-201ENST00000605464 2705 ntBASIC15.09■□□□□ 0.01
RETP07949 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
RETP07949 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RETP07949 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.09■□□□□ 0.01
RETP07949 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.09■□□□□ 0.01
RETP07949 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RETP07949 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
RETP07949 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.09■□□□□ 0.01
RETP07949 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RETP07949 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RETP07949 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RETP07949 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.09■□□□□ 0.01
RETP07949 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RETP07949 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.09■□□□□ 0.01
RETP07949 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RETP07949 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
RETP07949 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RETP07949 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RETP07949 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RETP07949 DNAJB1P1-201ENST00000429417 1024 ntBASIC15.09■□□□□ 0.01
RETP07949 AC104073.2-201ENST00000453737 312 ntBASIC15.09■□□□□ 0.01
RETP07949 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RETP07949 AL391280.1-201ENST00000506969 1062 ntBASIC15.09■□□□□ 0.01
RETP07949 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC15.09■□□□□ 0.01
RETP07949 CFL1-206ENST00000527344 962 ntTSL 2 BASIC15.09■□□□□ 0.01
RETP07949 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RETP07949 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RETP07949 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
RETP07949 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
RETP07949 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.09■□□□□ 0.01
RETP07949 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.09■□□□□ 0.01
RETP07949 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RETP07949 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.09■□□□□ 0.01
RETP07949 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RETP07949 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RETP07949 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC15.09■□□□□ 0.01
RETP07949 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RETP07949 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RETP07949 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RETP07949 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RETP07949 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RETP07949 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
RETP07949 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RETP07949 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.09■□□□□ 0.01
RETP07949 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.08■□□□□ 0.01
RETP07949 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RETP07949 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RETP07949 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
RETP07949 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RETP07949 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RETP07949 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
RETP07949 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RETP07949 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
RETP07949 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.08■□□□□ 0.01
RETP07949 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
RETP07949 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RETP07949 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RETP07949 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.08■□□□□ 0
RETP07949 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RETP07949 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.08■□□□□ 0
RETP07949 AP002414.2-201ENST00000591780 3365 ntBASIC15.08■□□□□ 0
RETP07949 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.08■□□□□ 0
RETP07949 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RETP07949 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RETP07949 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC15.08■□□□□ 0
RETP07949 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
RETP07949 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC15.08■□□□□ 0
RETP07949 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC15.08■□□□□ 0
RETP07949 RPL13AP19-201ENST00000434320 584 ntBASIC15.08■□□□□ 0
RETP07949 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC15.08■□□□□ 0
RETP07949 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.08■□□□□ 0
RETP07949 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RETP07949 AC125604.1-201ENST00000496255 707 ntBASIC15.08■□□□□ 0
RETP07949 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC15.08■□□□□ 0
RETP07949 RTN3P1-201ENST00000536295 711 ntBASIC15.08■□□□□ 0
RETP07949 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.08■□□□□ 0
RETP07949 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.08■□□□□ 0
RETP07949 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC15.08■□□□□ 0
RETP07949 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.08■□□□□ 0
RETP07949 WDR7-208ENST00000589935 544 ntTSL 4 BASIC15.08■□□□□ 0
RETP07949 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
RETP07949 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RETP07949 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RETP07949 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.08■□□□□ 0
RETP07949 AC004899.1-201ENST00000424687 1714 ntBASIC15.08■□□□□ 0
RETP07949 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RETP07949 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.08■□□□□ 0
RETP07949 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
RETP07949 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RETP07949 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
RETP07949 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RETP07949 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
RETP07949 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
RETP07949 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.08■□□□□ 0
RETP07949 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.07■□□□□ 0
RETP07949 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.07■□□□□ 0
RETP07949 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms