Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HMGCRP04035 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGCRP04035 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGCRP04035 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMGCRP04035 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.73■□□□□ 0.27
HMGCRP04035 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMGCRP04035 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGCRP04035 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGCRP04035 AC020658.6-201ENST00000623564 1870 ntBASIC16.73■□□□□ 0.27
HMGCRP04035 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGCRP04035 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGCRP04035 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGCRP04035 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGCRP04035 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.73■□□□□ 0.27
HMGCRP04035 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGCRP04035 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HMGCRP04035 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGCRP04035 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMGCRP04035 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGCRP04035 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.72■□□□□ 0.27
HMGCRP04035 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.72■□□□□ 0.27
HMGCRP04035 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.72■□□□□ 0.27
HMGCRP04035 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGCRP04035 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.72■□□□□ 0.27
HMGCRP04035 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGCRP04035 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGCRP04035 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.72■□□□□ 0.27
HMGCRP04035 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGCRP04035 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC16.72■□□□□ 0.27
HMGCRP04035 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGCRP04035 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGCRP04035 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC16.72■□□□□ 0.27
HMGCRP04035 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC16.72■□□□□ 0.27
HMGCRP04035 AL645933.1-201ENST00000440087 609 ntBASIC16.72■□□□□ 0.27
HMGCRP04035 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC16.72■□□□□ 0.27
HMGCRP04035 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC16.72■□□□□ 0.27
HMGCRP04035 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC16.72■□□□□ 0.27
HMGCRP04035 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.72■□□□□ 0.27
HMGCRP04035 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
HMGCRP04035 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
HMGCRP04035 AC073911.3-201ENST00000624401 631 ntBASIC16.72■□□□□ 0.27
HMGCRP04035 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGCRP04035 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HMGCRP04035 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HMGCRP04035 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGCRP04035 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGCRP04035 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.72■□□□□ 0.27
HMGCRP04035 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGCRP04035 AC092850.2-201ENST00000623821 2697 ntBASIC16.72■□□□□ 0.27
HMGCRP04035 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
HMGCRP04035 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGCRP04035 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGCRP04035 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGCRP04035 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HMGCRP04035 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC16.71■□□□□ 0.27
HMGCRP04035 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGCRP04035 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
HMGCRP04035 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HMGCRP04035 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGCRP04035 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGCRP04035 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGCRP04035 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGCRP04035 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGCRP04035 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
HMGCRP04035 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
HMGCRP04035 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.71■□□□□ 0.27
HMGCRP04035 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.71■□□□□ 0.27
HMGCRP04035 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGCRP04035 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGCRP04035 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HMGCRP04035 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC16.71■□□□□ 0.27
HMGCRP04035 AL807761.2-201ENST00000422849 729 ntBASIC16.71■□□□□ 0.27
HMGCRP04035 TLE1P1-201ENST00000422965 589 ntBASIC16.71■□□□□ 0.27
HMGCRP04035 LYPLA2P1-203ENST00000447689 696 ntBASIC16.71■□□□□ 0.27
HMGCRP04035 AL035414.1-201ENST00000451327 857 ntBASIC16.71■□□□□ 0.27
HMGCRP04035 AC010234.1-201ENST00000494599 870 ntBASIC16.71■□□□□ 0.27
HMGCRP04035 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.71■□□□□ 0.27
HMGCRP04035 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGCRP04035 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
HMGCRP04035 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC16.71■□□□□ 0.27
HMGCRP04035 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HMGCRP04035 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.71■□□□□ 0.27
HMGCRP04035 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC16.71■□□□□ 0.27
HMGCRP04035 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HMGCRP04035 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGCRP04035 AC012508.2-201ENST00000567613 1472 ntBASIC16.71■□□□□ 0.27
HMGCRP04035 CYP4F23P-201ENST00000593402 1579 ntBASIC16.71■□□□□ 0.27
HMGCRP04035 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGCRP04035 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGCRP04035 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGCRP04035 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.71■□□□□ 0.27
HMGCRP04035 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
HMGCRP04035 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
HMGCRP04035 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGCRP04035 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
HMGCRP04035 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGCRP04035 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGCRP04035 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC16.7■□□□□ 0.26
HMGCRP04035 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
HMGCRP04035 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms