Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC16.76■□□□□ 0.27
ALDH1A1P00352 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC16.76■□□□□ 0.27
ALDH1A1P00352 AC021016.3-201ENST00000608367 477 ntBASIC16.76■□□□□ 0.27
ALDH1A1P00352 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
ALDH1A1P00352 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC16.76■□□□□ 0.27
ALDH1A1P00352 LINC00244-201ENST00000625073 613 ntBASIC16.76■□□□□ 0.27
ALDH1A1P00352 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
ALDH1A1P00352 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALDH1A1P00352 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ALDH1A1P00352 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALDH1A1P00352 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC16.76■□□□□ 0.27
ALDH1A1P00352 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALDH1A1P00352 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALDH1A1P00352 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
ALDH1A1P00352 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALDH1A1P00352 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ALDH1A1P00352 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC16.75■□□□□ 0.27
ALDH1A1P00352 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC16.75■□□□□ 0.27
ALDH1A1P00352 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ALDH1A1P00352 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ALDH1A1P00352 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.75■□□□□ 0.27
ALDH1A1P00352 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ALDH1A1P00352 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ALDH1A1P00352 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ALDH1A1P00352 AC025183.3-201ENST00000623526 1482 ntBASIC16.75■□□□□ 0.27
ALDH1A1P00352 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.75■□□□□ 0.27
ALDH1A1P00352 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ALDH1A1P00352 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ALDH1A1P00352 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
ALDH1A1P00352 AP003680.1-201ENST00000598970 3660 ntBASIC16.75■□□□□ 0.27
ALDH1A1P00352 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ALDH1A1P00352 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ALDH1A1P00352 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC16.75■□□□□ 0.27
ALDH1A1P00352 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC16.75■□□□□ 0.27
ALDH1A1P00352 HLA-DPA2-205ENST00000433582 733 ntBASIC16.75■□□□□ 0.27
ALDH1A1P00352 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.75■□□□□ 0.27
ALDH1A1P00352 RN7SL582P-201ENST00000491078 279 ntBASIC16.75■□□□□ 0.27
ALDH1A1P00352 CISD2-202ENST00000503643 808 ntTSL 2 BASIC16.75■□□□□ 0.27
ALDH1A1P00352 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC16.75■□□□□ 0.27
ALDH1A1P00352 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ALDH1A1P00352 RNA5SP406-201ENST00000516106 112 ntBASIC16.75■□□□□ 0.27
ALDH1A1P00352 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC16.75■□□□□ 0.27
ALDH1A1P00352 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.75■□□□□ 0.27
ALDH1A1P00352 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC16.75■□□□□ 0.27
ALDH1A1P00352 CYP4F36P-201ENST00000589193 186 ntBASIC16.75■□□□□ 0.27
ALDH1A1P00352 AC010976.2-201ENST00000609697 852 ntBASIC16.75■□□□□ 0.27
ALDH1A1P00352 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ALDH1A1P00352 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ALDH1A1P00352 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ALDH1A1P00352 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ALDH1A1P00352 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ALDH1A1P00352 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ALDH1A1P00352 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
ALDH1A1P00352 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ALDH1A1P00352 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ALDH1A1P00352 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ALDH1A1P00352 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ALDH1A1P00352 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.75■□□□□ 0.27
ALDH1A1P00352 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ALDH1A1P00352 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.75■□□□□ 0.27
ALDH1A1P00352 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ALDH1A1P00352 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ALDH1A1P00352 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.74■□□□□ 0.27
ALDH1A1P00352 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ALDH1A1P00352 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
ALDH1A1P00352 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.74■□□□□ 0.27
ALDH1A1P00352 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ALDH1A1P00352 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ALDH1A1P00352 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
ALDH1A1P00352 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ALDH1A1P00352 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ALDH1A1P00352 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
ALDH1A1P00352 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ALDH1A1P00352 FLJ16779-201ENST00000612722 7638 ntBASIC16.74■□□□□ 0.27
ALDH1A1P00352 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.74■□□□□ 0.27
ALDH1A1P00352 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ALDH1A1P00352 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ALDH1A1P00352 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
ALDH1A1P00352 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC16.74■□□□□ 0.27
ALDH1A1P00352 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
ALDH1A1P00352 SAT1-201ENST00000379251 801 ntTSL 2 BASIC16.74■□□□□ 0.27
ALDH1A1P00352 SAT1-202ENST00000379253 909 ntTSL 2 BASIC16.74■□□□□ 0.27
ALDH1A1P00352 SAT1-203ENST00000379254 868 ntTSL 3 BASIC16.74■□□□□ 0.27
ALDH1A1P00352 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ALDH1A1P00352 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ALDH1A1P00352 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC16.74■□□□□ 0.27
ALDH1A1P00352 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC16.74■□□□□ 0.27
ALDH1A1P00352 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ALDH1A1P00352 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC16.74■□□□□ 0.27
ALDH1A1P00352 RN7SL277P-201ENST00000481521 288 ntBASIC16.74■□□□□ 0.27
ALDH1A1P00352 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
ALDH1A1P00352 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ALDH1A1P00352 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC16.74■□□□□ 0.27
ALDH1A1P00352 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC16.74■□□□□ 0.27
ALDH1A1P00352 AC068831.5-201ENST00000557387 328 ntBASIC16.74■□□□□ 0.27
ALDH1A1P00352 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC16.74■□□□□ 0.27
ALDH1A1P00352 ABHD17AP9-201ENST00000561925 548 ntBASIC16.74■□□□□ 0.27
ALDH1A1P00352 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC16.74■□□□□ 0.27
ALDH1A1P00352 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC16.74■□□□□ 0.27
ALDH1A1P00352 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms