Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.18□□□□□ -0.14
SNX4O95219 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SNX4O95219 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.18□□□□□ -0.14
SNX4O95219 CU634019.7-201ENST00000624153 1185 ntBASIC14.18□□□□□ -0.14
SNX4O95219 FP236241.2-201ENST00000624906 1185 ntBASIC14.18□□□□□ -0.14
SNX4O95219 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNX4O95219 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNX4O95219 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNX4O95219 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNX4O95219 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNX4O95219 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNX4O95219 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNX4O95219 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
SNX4O95219 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.18□□□□□ -0.14
SNX4O95219 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.18□□□□□ -0.14
SNX4O95219 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNX4O95219 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNX4O95219 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SNX4O95219 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNX4O95219 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SNX4O95219 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNX4O95219 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SNX4O95219 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNX4O95219 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.18□□□□□ -0.14
SNX4O95219 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNX4O95219 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SNX4O95219 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SNX4O95219 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SNX4O95219 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SNX4O95219 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.17□□□□□ -0.14
SNX4O95219 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNX4O95219 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNX4O95219 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNX4O95219 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNX4O95219 HSPA7-201ENST00000445535 1927 ntBASIC14.17□□□□□ -0.14
SNX4O95219 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNX4O95219 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.17□□□□□ -0.14
SNX4O95219 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.17□□□□□ -0.14
SNX4O95219 DRD5P1-201ENST00000456605 1438 ntBASIC14.17□□□□□ -0.14
SNX4O95219 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SNX4O95219 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.17□□□□□ -0.14
SNX4O95219 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SNX4O95219 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SNX4O95219 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SNX4O95219 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SNX4O95219 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SNX4O95219 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SNX4O95219 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNX4O95219 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.17□□□□□ -0.14
SNX4O95219 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.17□□□□□ -0.14
SNX4O95219 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNX4O95219 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.17□□□□□ -0.14
SNX4O95219 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.17□□□□□ -0.14
SNX4O95219 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.17□□□□□ -0.14
SNX4O95219 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.17□□□□□ -0.14
SNX4O95219 RN7SL837P-201ENST00000463010 287 ntBASIC14.17□□□□□ -0.14
SNX4O95219 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.17□□□□□ -0.14
SNX4O95219 GIMAP3P-201ENST00000495150 836 ntBASIC14.17□□□□□ -0.14
SNX4O95219 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.17□□□□□ -0.14
SNX4O95219 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.17□□□□□ -0.14
SNX4O95219 AC124283.3-201ENST00000570869 594 ntBASIC14.17□□□□□ -0.14
SNX4O95219 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.17□□□□□ -0.14
SNX4O95219 AC015936.2-201ENST00000593177 259 ntBASIC14.17□□□□□ -0.14
SNX4O95219 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.17□□□□□ -0.14
SNX4O95219 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SNX4O95219 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.17□□□□□ -0.14
SNX4O95219 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.17□□□□□ -0.14
SNX4O95219 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNX4O95219 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
SNX4O95219 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SNX4O95219 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SNX4O95219 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNX4O95219 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.17□□□□□ -0.14
SNX4O95219 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.17□□□□□ -0.14
SNX4O95219 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.17□□□□□ -0.14
SNX4O95219 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.17□□□□□ -0.14
SNX4O95219 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNX4O95219 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.17□□□□□ -0.14
SNX4O95219 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNX4O95219 AC084364.1-201ENST00000551967 1556 ntBASIC14.17□□□□□ -0.14
SNX4O95219 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SNX4O95219 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNX4O95219 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNX4O95219 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.17□□□□□ -0.14
SNX4O95219 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.17□□□□□ -0.14
SNX4O95219 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SNX4O95219 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.17□□□□□ -0.14
SNX4O95219 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SNX4O95219 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SNX4O95219 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.16□□□□□ -0.14
SNX4O95219 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.16□□□□□ -0.14
SNX4O95219 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX4O95219 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SNX4O95219 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX4O95219 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX4O95219 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SNX4O95219 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX4O95219 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SNX4O95219 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SNX4O95219 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms