Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LGR5O75473 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.54■□□□□ 0.24
LGR5O75473 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.54■□□□□ 0.24
LGR5O75473 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.54■□□□□ 0.24
LGR5O75473 AC011742.3-201ENST00000439053 820 ntBASIC16.54■□□□□ 0.24
LGR5O75473 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.54■□□□□ 0.24
LGR5O75473 TMEM198B-204ENST00000484016 896 ntBASIC16.54■□□□□ 0.24
LGR5O75473 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.54■□□□□ 0.24
LGR5O75473 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.54■□□□□ 0.24
LGR5O75473 HLA-J-204ENST00000495278 958 ntBASIC16.54■□□□□ 0.24
LGR5O75473 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.54■□□□□ 0.24
LGR5O75473 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.54■□□□□ 0.24
LGR5O75473 FGFR3P5-201ENST00000564496 886 ntBASIC16.54■□□□□ 0.24
LGR5O75473 SNORD3B-2-202ENST00000571722 791 ntBASIC16.54■□□□□ 0.24
LGR5O75473 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.54■□□□□ 0.24
LGR5O75473 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LGR5O75473 AC026740.1-201ENST00000607068 791 ntBASIC16.54■□□□□ 0.24
LGR5O75473 AC090164.2-201ENST00000611487 516 ntBASIC16.54■□□□□ 0.24
LGR5O75473 AC027601.3-201ENST00000622907 509 ntBASIC16.54■□□□□ 0.24
LGR5O75473 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LGR5O75473 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LGR5O75473 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LGR5O75473 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LGR5O75473 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LGR5O75473 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.54■□□□□ 0.24
LGR5O75473 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.54■□□□□ 0.24
LGR5O75473 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LGR5O75473 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LGR5O75473 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LGR5O75473 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LGR5O75473 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LGR5O75473 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.54■□□□□ 0.24
LGR5O75473 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LGR5O75473 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LGR5O75473 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LGR5O75473 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.54■□□□□ 0.24
LGR5O75473 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LGR5O75473 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.53■□□□□ 0.24
LGR5O75473 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LGR5O75473 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LGR5O75473 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LGR5O75473 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
LGR5O75473 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LGR5O75473 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LGR5O75473 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LGR5O75473 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.53■□□□□ 0.24
LGR5O75473 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LGR5O75473 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LGR5O75473 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
LGR5O75473 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LGR5O75473 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
LGR5O75473 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.53■□□□□ 0.24
LGR5O75473 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LGR5O75473 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LGR5O75473 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LGR5O75473 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LGR5O75473 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LGR5O75473 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
LGR5O75473 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LGR5O75473 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LGR5O75473 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.53■□□□□ 0.24
LGR5O75473 MAGEA5-201ENST00000446757 942 ntBASIC16.53■□□□□ 0.24
LGR5O75473 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.53■□□□□ 0.24
LGR5O75473 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LGR5O75473 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
LGR5O75473 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LGR5O75473 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.53■□□□□ 0.24
LGR5O75473 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.53■□□□□ 0.24
LGR5O75473 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LGR5O75473 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.53■□□□□ 0.24
LGR5O75473 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.53■□□□□ 0.24
LGR5O75473 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.53■□□□□ 0.24
LGR5O75473 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.53■□□□□ 0.24
LGR5O75473 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.53■□□□□ 0.24
LGR5O75473 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.53■□□□□ 0.24
LGR5O75473 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.53■□□□□ 0.24
LGR5O75473 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LGR5O75473 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LGR5O75473 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LGR5O75473 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LGR5O75473 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.53■□□□□ 0.24
LGR5O75473 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.53■□□□□ 0.24
LGR5O75473 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LGR5O75473 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.53■□□□□ 0.24
LGR5O75473 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LGR5O75473 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LGR5O75473 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LGR5O75473 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LGR5O75473 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LGR5O75473 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.53■□□□□ 0.24
LGR5O75473 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LGR5O75473 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
LGR5O75473 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LGR5O75473 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LGR5O75473 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LGR5O75473 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LGR5O75473 AC008132.1-202ENST00000342005 1389 ntBASIC16.52■□□□□ 0.24
LGR5O75473 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LGR5O75473 CICP4-201ENST00000447359 2812 ntBASIC16.52■□□□□ 0.24
LGR5O75473 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms