Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
CDH16O75309 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.18■□□□□ 0.02
CDH16O75309 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH16O75309 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH16O75309 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH16O75309 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.18■□□□□ 0.02
CDH16O75309 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CDH16O75309 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH16O75309 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CDH16O75309 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH16O75309 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
CDH16O75309 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH16O75309 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH16O75309 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH16O75309 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH16O75309 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH16O75309 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.18■□□□□ 0.02
CDH16O75309 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.18■□□□□ 0.02
CDH16O75309 CNN2P11-201ENST00000429351 262 ntBASIC15.18■□□□□ 0.02
CDH16O75309 HLA-K-203ENST00000430151 1046 ntBASIC15.18■□□□□ 0.02
CDH16O75309 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.18■□□□□ 0.02
CDH16O75309 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CDH16O75309 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH16O75309 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.18■□□□□ 0.02
CDH16O75309 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.18■□□□□ 0.02
CDH16O75309 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.18■□□□□ 0.02
CDH16O75309 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.18■□□□□ 0.02
CDH16O75309 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH16O75309 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.18■□□□□ 0.02
CDH16O75309 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH16O75309 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH16O75309 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC15.18■□□□□ 0.02
CDH16O75309 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH16O75309 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH16O75309 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
CDH16O75309 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH16O75309 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH16O75309 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH16O75309 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH16O75309 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH16O75309 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDH16O75309 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CDH16O75309 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.18■□□□□ 0.02
CDH16O75309 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC15.18■□□□□ 0.02
CDH16O75309 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH16O75309 PPT1-213ENST00000641319 2388 ntBASIC15.18■□□□□ 0.02
CDH16O75309 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH16O75309 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDH16O75309 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC15.18■□□□□ 0.02
CDH16O75309 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH16O75309 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH16O75309 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH16O75309 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CDH16O75309 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH16O75309 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH16O75309 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH16O75309 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH16O75309 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH16O75309 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH16O75309 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH16O75309 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CDH16O75309 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH16O75309 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH16O75309 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH16O75309 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH16O75309 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH16O75309 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.17■□□□□ 0.02
CDH16O75309 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH16O75309 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.17■□□□□ 0.02
CDH16O75309 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH16O75309 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH16O75309 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CDH16O75309 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.17■□□□□ 0.02
CDH16O75309 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.17■□□□□ 0.02
CDH16O75309 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH16O75309 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH16O75309 DNAJB3-202ENST00000449667 1266 ntBASIC15.17■□□□□ 0.02
CDH16O75309 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.17■□□□□ 0.02
CDH16O75309 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.17■□□□□ 0.02
CDH16O75309 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.17■□□□□ 0.02
CDH16O75309 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.17■□□□□ 0.02
CDH16O75309 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.17■□□□□ 0.02
CDH16O75309 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.17■□□□□ 0.02
CDH16O75309 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.17■□□□□ 0.02
CDH16O75309 AP001160.2-201ENST00000596071 487 ntBASIC15.17■□□□□ 0.02
CDH16O75309 MIR6080-201ENST00000617359 66 ntBASIC15.17■□□□□ 0.02
CDH16O75309 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.17■□□□□ 0.02
CDH16O75309 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH16O75309 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
CDH16O75309 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH16O75309 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH16O75309 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH16O75309 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH16O75309 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
CDH16O75309 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH16O75309 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH16O75309 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.17■□□□□ 0.02
CDH16O75309 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH16O75309 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH16O75309 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms