Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.53□□□□□ -0.08
SLC28A2O43868 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC28A2O43868 ZBED1P1-201ENST00000502364 1930 ntBASIC14.53□□□□□ -0.08
SLC28A2O43868 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLC28A2O43868 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLC28A2O43868 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SLC28A2O43868 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLC28A2O43868 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLC28A2O43868 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.52□□□□□ -0.08
SLC28A2O43868 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.52□□□□□ -0.08
SLC28A2O43868 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLC28A2O43868 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
SLC28A2O43868 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.52□□□□□ -0.08
SLC28A2O43868 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.52□□□□□ -0.08
SLC28A2O43868 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLC28A2O43868 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
SLC28A2O43868 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SLC28A2O43868 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SLC28A2O43868 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.52□□□□□ -0.08
SLC28A2O43868 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLC28A2O43868 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SLC28A2O43868 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLC28A2O43868 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.52□□□□□ -0.08
SLC28A2O43868 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SLC28A2O43868 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SLC28A2O43868 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLC28A2O43868 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SLC28A2O43868 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLC28A2O43868 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SLC28A2O43868 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC14.52□□□□□ -0.09
SLC28A2O43868 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.52□□□□□ -0.09
SLC28A2O43868 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC14.52□□□□□ -0.09
SLC28A2O43868 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.52□□□□□ -0.09
SLC28A2O43868 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC14.52□□□□□ -0.09
SLC28A2O43868 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SLC28A2O43868 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLC28A2O43868 AC026740.1-201ENST00000607068 791 ntBASIC14.52□□□□□ -0.09
SLC28A2O43868 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC14.52□□□□□ -0.09
SLC28A2O43868 AC244669.2-201ENST00000612320 853 ntBASIC14.52□□□□□ -0.09
SLC28A2O43868 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.52□□□□□ -0.09
SLC28A2O43868 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
SLC28A2O43868 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLC28A2O43868 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.52□□□□□ -0.09
SLC28A2O43868 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
SLC28A2O43868 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SLC28A2O43868 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.52□□□□□ -0.09
SLC28A2O43868 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.52□□□□□ -0.09
SLC28A2O43868 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLC28A2O43868 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLC28A2O43868 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLC28A2O43868 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLC28A2O43868 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
SLC28A2O43868 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLC28A2O43868 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SLC28A2O43868 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLC28A2O43868 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLC28A2O43868 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SLC28A2O43868 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
SLC28A2O43868 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.52□□□□□ -0.09
SLC28A2O43868 AC013726.1-201ENST00000563747 2285 ntBASIC14.52□□□□□ -0.09
SLC28A2O43868 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC28A2O43868 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC28A2O43868 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SLC28A2O43868 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.51□□□□□ -0.09
SLC28A2O43868 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SLC28A2O43868 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SLC28A2O43868 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SLC28A2O43868 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC28A2O43868 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SLC28A2O43868 WASH3P-207ENST00000560956 1394 ntBASIC14.51□□□□□ -0.09
SLC28A2O43868 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC28A2O43868 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SLC28A2O43868 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SLC28A2O43868 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC28A2O43868 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC28A2O43868 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC28A2O43868 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SLC28A2O43868 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC28A2O43868 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SLC28A2O43868 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SLC28A2O43868 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC28A2O43868 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC28A2O43868 AC074338.1-201ENST00000416825 156 ntBASIC14.51□□□□□ -0.09
SLC28A2O43868 SOCS2P1-201ENST00000417727 557 ntBASIC14.51□□□□□ -0.09
SLC28A2O43868 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.51□□□□□ -0.09
SLC28A2O43868 AC007969.1-201ENST00000433675 447 ntBASIC14.51□□□□□ -0.09
SLC28A2O43868 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC28A2O43868 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC14.51□□□□□ -0.09
SLC28A2O43868 RN7SL769P-201ENST00000469386 295 ntBASIC14.51□□□□□ -0.09
SLC28A2O43868 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.51□□□□□ -0.09
SLC28A2O43868 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
SLC28A2O43868 AC009486.1-201ENST00000569860 813 ntBASIC14.51□□□□□ -0.09
SLC28A2O43868 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.51□□□□□ -0.09
SLC28A2O43868 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC14.51□□□□□ -0.09
SLC28A2O43868 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SLC28A2O43868 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SLC28A2O43868 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.51□□□□□ -0.09
SLC28A2O43868 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.51□□□□□ -0.09
SLC28A2O43868 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.51□□□□□ -0.09
SLC28A2O43868 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 203.3 ms