Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC11.3□□□□□ -0.6
SNAI2O43623 IGHV3-62-201ENST00000520057 340 ntBASIC11.3□□□□□ -0.6
SNAI2O43623 AC015910.1-201ENST00000579400 975 ntBASIC11.3□□□□□ -0.6
SNAI2O43623 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC11.3□□□□□ -0.6
SNAI2O43623 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC11.3□□□□□ -0.6
SNAI2O43623 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC11.3□□□□□ -0.6
SNAI2O43623 AC084121.4-201ENST00000641598 221 ntBASIC11.3□□□□□ -0.6
SNAI2O43623 AF228730.8-201ENST00000642140 221 ntBASIC11.3□□□□□ -0.6
SNAI2O43623 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
SNAI2O43623 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC11.3□□□□□ -0.6
SNAI2O43623 GRN-214ENST00000589265 1632 ntTSL 5 BASIC11.3□□□□□ -0.6
SNAI2O43623 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC11.3□□□□□ -0.6
SNAI2O43623 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC11.3□□□□□ -0.6
SNAI2O43623 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC11.3□□□□□ -0.6
SNAI2O43623 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
SNAI2O43623 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC11.3□□□□□ -0.6
SNAI2O43623 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
SNAI2O43623 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
SNAI2O43623 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC11.3□□□□□ -0.6
SNAI2O43623 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 SLC6A6P1-201ENST00000413933 1850 ntBASIC11.29□□□□□ -0.6
SNAI2O43623 POM121L4P-202ENST00000427789 1891 ntBASIC11.29□□□□□ -0.6
SNAI2O43623 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
SNAI2O43623 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC11.29□□□□□ -0.6
SNAI2O43623 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC11.29□□□□□ -0.6
SNAI2O43623 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC11.29□□□□□ -0.6
SNAI2O43623 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC11.29□□□□□ -0.6
SNAI2O43623 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC11.29□□□□□ -0.6
SNAI2O43623 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
SNAI2O43623 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC11.29□□□□□ -0.6
SNAI2O43623 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
SNAI2O43623 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC11.29□□□□□ -0.6
SNAI2O43623 AC007787.1-201ENST00000588095 1583 ntBASIC11.29□□□□□ -0.6
SNAI2O43623 REXO1L4P-201ENST00000605109 1937 ntBASIC11.29□□□□□ -0.6
SNAI2O43623 USP3-204ENST00000540797 5474 ntTSL 2 BASIC11.29□□□□□ -0.6
SNAI2O43623 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 AC015802.1-201ENST00000588104 1449 ntBASIC11.29□□□□□ -0.6
SNAI2O43623 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
SNAI2O43623 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
SNAI2O43623 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC11.29□□□□□ -0.6
SNAI2O43623 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 AC018529.2-202ENST00000611482 3087 ntBASIC11.29□□□□□ -0.6
SNAI2O43623 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
SNAI2O43623 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 SPDYE17-201ENST00000412399 783 ntBASIC11.29□□□□□ -0.6
SNAI2O43623 HIST3H2BA-201ENST00000436555 524 ntBASIC11.29□□□□□ -0.6
SNAI2O43623 SPDYE11-202ENST00000450699 704 ntBASIC11.29□□□□□ -0.6
SNAI2O43623 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC11.29□□□□□ -0.6
SNAI2O43623 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC11.29□□□□□ -0.6
SNAI2O43623 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC11.29□□□□□ -0.6
SNAI2O43623 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC11.29□□□□□ -0.6
SNAI2O43623 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC11.29□□□□□ -0.6
SNAI2O43623 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC11.29□□□□□ -0.6
SNAI2O43623 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SNAI2O43623 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC11.29□□□□□ -0.6
SNAI2O43623 RARRES2P9-201ENST00000565168 469 ntBASIC11.29□□□□□ -0.6
SNAI2O43623 AC106730.1-201ENST00000566722 1090 ntBASIC11.29□□□□□ -0.6
SNAI2O43623 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC11.29□□□□□ -0.6
SNAI2O43623 SPDYE9P-201ENST00000570642 692 ntBASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms