Protein–RNA interactions for Protein: O15068

MCF2L, Guanine nucleotide exchange factor DBS, humanhuman

Predictions only

Length 1,137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2LO15068 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MCF2LO15068 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.72■□□□□ 0.11
MCF2LO15068 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MCF2LO15068 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.72■□□□□ 0.11
MCF2LO15068 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.72■□□□□ 0.11
MCF2LO15068 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.72■□□□□ 0.11
MCF2LO15068 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.72■□□□□ 0.11
MCF2LO15068 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
MCF2LO15068 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
MCF2LO15068 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MCF2LO15068 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.72■□□□□ 0.11
MCF2LO15068 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.72■□□□□ 0.11
MCF2LO15068 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.72■□□□□ 0.11
MCF2LO15068 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MCF2LO15068 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
MCF2LO15068 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.72■□□□□ 0.11
MCF2LO15068 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
MCF2LO15068 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.72■□□□□ 0.11
MCF2LO15068 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MCF2LO15068 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.72■□□□□ 0.11
MCF2LO15068 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MCF2LO15068 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MCF2LO15068 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MCF2LO15068 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MCF2LO15068 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
MCF2LO15068 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.71■□□□□ 0.11
MCF2LO15068 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
MCF2LO15068 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
MCF2LO15068 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
MCF2LO15068 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MCF2LO15068 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MCF2LO15068 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
MCF2LO15068 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.71■□□□□ 0.11
MCF2LO15068 AC093525.8-201ENST00000624099 1342 ntBASIC15.71■□□□□ 0.11
MCF2LO15068 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MCF2LO15068 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
MCF2LO15068 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.71■□□□□ 0.11
MCF2LO15068 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
MCF2LO15068 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
MCF2LO15068 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.71■□□□□ 0.11
MCF2LO15068 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
MCF2LO15068 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MCF2LO15068 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MCF2LO15068 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.71■□□□□ 0.11
MCF2LO15068 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.71■□□□□ 0.11
MCF2LO15068 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.71■□□□□ 0.11
MCF2LO15068 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MCF2LO15068 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
MCF2LO15068 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.71■□□□□ 0.11
MCF2LO15068 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.71■□□□□ 0.11
MCF2LO15068 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.71■□□□□ 0.11
MCF2LO15068 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.71■□□□□ 0.11
MCF2LO15068 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.71■□□□□ 0.11
MCF2LO15068 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.71■□□□□ 0.11
MCF2LO15068 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.71■□□□□ 0.11
MCF2LO15068 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.71■□□□□ 0.11
MCF2LO15068 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.71■□□□□ 0.11
MCF2LO15068 PTP4A1P2-201ENST00000546033 454 ntBASIC15.71■□□□□ 0.11
MCF2LO15068 AC009486.1-201ENST00000569860 813 ntBASIC15.71■□□□□ 0.11
MCF2LO15068 CLUHP6-201ENST00000580789 941 ntBASIC15.71■□□□□ 0.11
MCF2LO15068 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.71■□□□□ 0.11
MCF2LO15068 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.71■□□□□ 0.11
MCF2LO15068 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.71■□□□□ 0.11
MCF2LO15068 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.71■□□□□ 0.11
MCF2LO15068 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.71■□□□□ 0.11
MCF2LO15068 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
MCF2LO15068 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MCF2LO15068 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.71■□□□□ 0.11
MCF2LO15068 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
MCF2LO15068 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
MCF2LO15068 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
MCF2LO15068 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
MCF2LO15068 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
MCF2LO15068 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
MCF2LO15068 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
MCF2LO15068 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.71■□□□□ 0.1
MCF2LO15068 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
MCF2LO15068 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
MCF2LO15068 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.71■□□□□ 0.1
MCF2LO15068 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
MCF2LO15068 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.71■□□□□ 0.1
MCF2LO15068 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
MCF2LO15068 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
MCF2LO15068 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
MCF2LO15068 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
MCF2LO15068 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MCF2LO15068 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.7■□□□□ 0.1
MCF2LO15068 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MCF2LO15068 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MCF2LO15068 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MCF2LO15068 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.7■□□□□ 0.1
MCF2LO15068 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
MCF2LO15068 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.7■□□□□ 0.1
MCF2LO15068 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MCF2LO15068 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MCF2LO15068 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MCF2LO15068 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
MCF2LO15068 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MCF2LO15068 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MCF2LO15068 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms