Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A1O14983 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A1O14983 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
ATP2A1O14983 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC17.05■□□□□ 0.32
ATP2A1O14983 AL596276.2-201ENST00000447525 331 ntBASIC17.05■□□□□ 0.32
ATP2A1O14983 AL035414.1-201ENST00000451327 857 ntBASIC17.05■□□□□ 0.32
ATP2A1O14983 CICP12-201ENST00000455801 843 ntBASIC17.05■□□□□ 0.32
ATP2A1O14983 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.05■□□□□ 0.32
ATP2A1O14983 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
ATP2A1O14983 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.05■□□□□ 0.32
ATP2A1O14983 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.05■□□□□ 0.32
ATP2A1O14983 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.05■□□□□ 0.32
ATP2A1O14983 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.05■□□□□ 0.32
ATP2A1O14983 RN7SL190P-201ENST00000582519 257 ntBASIC17.05■□□□□ 0.32
ATP2A1O14983 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A1O14983 AC009884.2-201ENST00000603110 324 ntBASIC17.05■□□□□ 0.32
ATP2A1O14983 AC027601.3-201ENST00000622907 509 ntBASIC17.05■□□□□ 0.32
ATP2A1O14983 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.05■□□□□ 0.32
ATP2A1O14983 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A1O14983 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A1O14983 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A1O14983 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.05■□□□□ 0.32
ATP2A1O14983 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A1O14983 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.05■□□□□ 0.32
ATP2A1O14983 ZBED1P1-201ENST00000502364 1930 ntBASIC17.05■□□□□ 0.32
ATP2A1O14983 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.05■□□□□ 0.32
ATP2A1O14983 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A1O14983 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A1O14983 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A1O14983 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A1O14983 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
ATP2A1O14983 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.05■□□□□ 0.32
ATP2A1O14983 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A1O14983 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A1O14983 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.05■□□□□ 0.32
ATP2A1O14983 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.05■□□□□ 0.32
ATP2A1O14983 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A1O14983 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17.05■□□□□ 0.32
ATP2A1O14983 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A1O14983 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A1O14983 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A1O14983 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP2A1O14983 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
ATP2A1O14983 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
ATP2A1O14983 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
ATP2A1O14983 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2A1O14983 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2A1O14983 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2A1O14983 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.04■□□□□ 0.32
ATP2A1O14983 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2A1O14983 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2A1O14983 MBLAC2-202ENST00000514906 1936 ntBASIC17.04■□□□□ 0.32
ATP2A1O14983 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC17.04■□□□□ 0.32
ATP2A1O14983 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.04■□□□□ 0.32
ATP2A1O14983 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2A1O14983 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
ATP2A1O14983 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2A1O14983 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2A1O14983 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2A1O14983 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC17.04■□□□□ 0.32
ATP2A1O14983 NUP210P1-202ENST00000504322 710 ntBASIC17.04■□□□□ 0.32
ATP2A1O14983 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2A1O14983 AF254983.2-201ENST00000612331 135 ntBASIC17.04■□□□□ 0.32
ATP2A1O14983 AC079336.7-201ENST00000623428 1078 ntBASIC17.04■□□□□ 0.32
ATP2A1O14983 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC17.04■□□□□ 0.32
ATP2A1O14983 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.04■□□□□ 0.32
ATP2A1O14983 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.04■□□□□ 0.32
ATP2A1O14983 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.04■□□□□ 0.32
ATP2A1O14983 TK2-221ENST00000620035 5060 ntTSL 2 BASIC17.04■□□□□ 0.32
ATP2A1O14983 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2A1O14983 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.04■□□□□ 0.32
ATP2A1O14983 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
ATP2A1O14983 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.04■□□□□ 0.32
ATP2A1O14983 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.04■□□□□ 0.32
ATP2A1O14983 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2A1O14983 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2A1O14983 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
ATP2A1O14983 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ATP2A1O14983 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP2A1O14983 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
ATP2A1O14983 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP2A1O14983 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.03■□□□□ 0.32
ATP2A1O14983 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.03■□□□□ 0.32
ATP2A1O14983 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP2A1O14983 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATP2A1O14983 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.03■□□□□ 0.32
ATP2A1O14983 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATP2A1O14983 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATP2A1O14983 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP2A1O14983 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATP2A1O14983 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATP2A1O14983 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.03■□□□□ 0.32
ATP2A1O14983 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
ATP2A1O14983 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.03■□□□□ 0.32
ATP2A1O14983 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.03■□□□□ 0.32
ATP2A1O14983 AL157407.1-201ENST00000435784 904 ntBASIC17.03■□□□□ 0.32
ATP2A1O14983 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC17.03■□□□□ 0.32
ATP2A1O14983 AC012618.1-201ENST00000461223 412 ntBASIC17.03■□□□□ 0.32
ATP2A1O14983 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATP2A1O14983 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms