Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 MIR1247-201ENST00000408206 136 ntBASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 EIF3FP3-201ENST00000434851 1086 ntBASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 AC006033.1-201ENST00000440505 426 ntBASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 AC245100.3-201ENST00000441281 285 ntBASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 EEF1DP1-201ENST00000585891 896 ntBASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 AC015818.8-201ENST00000587907 1519 ntBASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 REXO1L5P-201ENST00000622260 2098 ntBASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 TCAF2P1-201ENST00000291129 2421 ntBASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 AL513477.1-201ENST00000602865 2407 ntBASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 GPAA1P2-201ENST00000417923 928 ntBASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 CNN2P10-201ENST00000443067 918 ntBASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 C2orf69P2-201ENST00000562032 1123 ntBASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 SNX12-206ENST00000622259 661 ntTSL 5 BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NPIPA3F8WFD2 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms