Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC144AA2RUR9 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CCDC144AA2RUR9 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CCDC144AA2RUR9 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CCDC144AA2RUR9 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CCDC144AA2RUR9 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC144AA2RUR9 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC144AA2RUR9 RNA5SP359-201ENST00000364838 113 ntBASIC21.19■□□□□ 0.98
CCDC144AA2RUR9 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC21.19■□□□□ 0.98
CCDC144AA2RUR9 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC144AA2RUR9 GAS5-209ENST00000430245 723 ntTSL 3 BASIC21.19■□□□□ 0.98
CCDC144AA2RUR9 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC21.19■□□□□ 0.98
CCDC144AA2RUR9 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC144AA2RUR9 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC144AA2RUR9 CFL1-214ENST00000534769 758 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC144AA2RUR9 AC027237.1-201ENST00000560942 655 ntBASIC21.19■□□□□ 0.98
CCDC144AA2RUR9 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC21.19■□□□□ 0.98
CCDC144AA2RUR9 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC144AA2RUR9 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC144AA2RUR9 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC144AA2RUR9 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC144AA2RUR9 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC144AA2RUR9 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC144AA2RUR9 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC144AA2RUR9 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC144AA2RUR9 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 TBC1D3J-201ENST00000620719 1426 ntBASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 MX1-218ENST00000619682 1980 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 POU5F1P2-201ENST00000521750 823 ntBASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC144AA2RUR9 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CCDC144AA2RUR9 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CCDC144AA2RUR9 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC144AA2RUR9 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC144AA2RUR9 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC144AA2RUR9 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC144AA2RUR9 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC144AA2RUR9 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC144AA2RUR9 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CCDC144AA2RUR9 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CCDC144AA2RUR9 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC144AA2RUR9 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC144AA2RUR9 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC21.17■□□□□ 0.98
CCDC144AA2RUR9 TSPY25P-201ENST00000429463 745 ntBASIC21.17■□□□□ 0.98
CCDC144AA2RUR9 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC144AA2RUR9 RN7SL258P-201ENST00000478664 300 ntBASIC21.17■□□□□ 0.98
CCDC144AA2RUR9 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC144AA2RUR9 AC019193.1-201ENST00000506678 823 ntBASIC21.17■□□□□ 0.98
CCDC144AA2RUR9 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC144AA2RUR9 PGAM1P5-201ENST00000548011 764 ntBASIC21.17■□□□□ 0.98
CCDC144AA2RUR9 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC144AA2RUR9 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC144AA2RUR9 HPN-206ENST00000597419 1212 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC144AA2RUR9 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC144AA2RUR9 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC144AA2RUR9 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC144AA2RUR9 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC144AA2RUR9 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CCDC144AA2RUR9 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC144AA2RUR9 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC144AA2RUR9 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC144AA2RUR9 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms