Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 RPS24-214ENST00000613865 538 ntTSL 5 BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.11□□□□□ -0.47
TCRBV4S1A1TA0A5B7 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AC012508.2-201ENST00000567613 1472 ntBASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AC005229.1-201ENST00000392885 409 ntBASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 HLA-V-201ENST00000429037 534 ntBASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AC015910.1-201ENST00000579400 975 ntBASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 MIR6799-201ENST00000620297 69 ntBASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 PDIA3P1-201ENST00000471856 1510 ntBASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 CICP4-201ENST00000447359 2812 ntBASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.1□□□□□ -0.47
TCRBV4S1A1TA0A5B7 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
TCRBV4S1A1TA0A5B7 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms