Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 HLA-K-203ENST00000430151 1046 ntBASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 AL353779.1-201ENST00000434793 351 ntBASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 AC067863.1-201ENST00000494933 530 ntBASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 AC097493.3-201ENST00000509725 367 ntBASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 AL590560.3-201ENST00000623350 461 ntBASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 AC073548.1-201ENST00000624088 1882 ntBASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 AL354702.1-201ENST00000442006 1960 ntBASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 AC020658.7-201ENST00000624274 2442 ntBASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 AL158070.2-201ENST00000623713 1621 ntBASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 DRD5P1-201ENST00000456605 1438 ntBASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 CLK3P2-201ENST00000427566 1453 ntBASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 CBFB-203ENST00000561924 584 ntTSL 5 BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 AC004449.1-201ENST00000564240 433 ntBASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 AC090505.1-201ENST00000430515 1834 ntBASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
TRBV6-7A0A0A0MS04 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRBV6-7A0A0A0MS04 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
TRBV6-7A0A0A0MS04 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRBV6-7A0A0A0MS04 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
TRBV6-7A0A0A0MS04 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
TRBV6-7A0A0A0MS04 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
TRBV6-7A0A0A0MS04 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRBV6-7A0A0A0MS04 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRBV6-7A0A0A0MS04 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms