Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 BX088702.1-201ENST00000610784 235 ntBASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
ZC3H4Q9UPT8 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 AC126177.1-201ENST00000547829 2218 ntBASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 UROS-201ENST00000368774 744 ntTSL 2 BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 BRI3P1-201ENST00000440440 378 ntBASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 RHEB-207ENST00000496004 744 ntTSL 2 BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 NEU3-207ENST00000534628 746 ntTSL 2 BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
ZC3H4Q9UPT8 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 AL672207.1-201ENST00000328462 1570 ntBASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ZC3H4Q9UPT8 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms