Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
STAG3Q9UJ98 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
STAG3Q9UJ98 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC21.29■■□□□ 1
STAG3Q9UJ98 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC21.29■■□□□ 1
STAG3Q9UJ98 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
STAG3Q9UJ98 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
STAG3Q9UJ98 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
STAG3Q9UJ98 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC21.29■■□□□ 1
STAG3Q9UJ98 RNA5SP359-201ENST00000364838 113 ntBASIC21.29■■□□□ 1
STAG3Q9UJ98 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC21.29■■□□□ 1
STAG3Q9UJ98 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC21.29■■□□□ 1
STAG3Q9UJ98 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC21.29■■□□□ 1
STAG3Q9UJ98 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC21.29■■□□□ 1
STAG3Q9UJ98 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC21.29■■□□□ 1
STAG3Q9UJ98 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
STAG3Q9UJ98 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
STAG3Q9UJ98 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
STAG3Q9UJ98 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC21.29■■□□□ 1
STAG3Q9UJ98 MIR3180-2-201ENST00000581748 88 ntBASIC21.29■■□□□ 1
STAG3Q9UJ98 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
STAG3Q9UJ98 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC21.29■■□□□ 1
STAG3Q9UJ98 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC21.29■■□□□ 1
STAG3Q9UJ98 ABR-203ENST00000536794 2213 ntTSL 2 BASIC21.29■■□□□ 1
STAG3Q9UJ98 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC21.29■■□□□ 1
STAG3Q9UJ98 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC21.29■■□□□ 1
STAG3Q9UJ98 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
STAG3Q9UJ98 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC21.29■■□□□ 1
STAG3Q9UJ98 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC21.29■■□□□ 1
STAG3Q9UJ98 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
STAG3Q9UJ98 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC21.29■■□□□ 1
STAG3Q9UJ98 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
STAG3Q9UJ98 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
STAG3Q9UJ98 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC21.29■■□□□ 1
STAG3Q9UJ98 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
STAG3Q9UJ98 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
STAG3Q9UJ98 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC21.28■■□□□ 1
STAG3Q9UJ98 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
STAG3Q9UJ98 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
STAG3Q9UJ98 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
STAG3Q9UJ98 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
STAG3Q9UJ98 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC21.28■■□□□ 1
STAG3Q9UJ98 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
STAG3Q9UJ98 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
STAG3Q9UJ98 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC21.28■■□□□ 1
STAG3Q9UJ98 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
STAG3Q9UJ98 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
STAG3Q9UJ98 AC234644.1-201ENST00000406065 370 ntBASIC21.28■■□□□ 1
STAG3Q9UJ98 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC21.28■■□□□ 1
STAG3Q9UJ98 HCG24-202ENST00000414398 717 ntTSL 3 BASIC21.28■■□□□ 1
STAG3Q9UJ98 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC21.28■■□□□ 1
STAG3Q9UJ98 RN7SL81P-201ENST00000493781 261 ntBASIC21.28■■□□□ 1
STAG3Q9UJ98 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC21.28■■□□□ 1
STAG3Q9UJ98 POLD4-208ENST00000532830 904 ntTSL 3 BASIC21.28■■□□□ 1
STAG3Q9UJ98 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC21.28■■□□□ 1
STAG3Q9UJ98 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC21.28■■□□□ 1
STAG3Q9UJ98 AP000240.1-201ENST00000609910 452 ntBASIC21.28■■□□□ 1
STAG3Q9UJ98 AC005618.3-201ENST00000624928 458 ntBASIC21.28■■□□□ 1
STAG3Q9UJ98 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC21.28■■□□□ 1
STAG3Q9UJ98 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC21.28■■□□□ 1
STAG3Q9UJ98 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC21.28■■□□□ 1
STAG3Q9UJ98 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC21.28■■□□□ 1
STAG3Q9UJ98 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
STAG3Q9UJ98 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
STAG3Q9UJ98 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC21.28■■□□□ 1
STAG3Q9UJ98 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
STAG3Q9UJ98 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
STAG3Q9UJ98 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC21.28■■□□□ 1
STAG3Q9UJ98 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
STAG3Q9UJ98 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC21.28■■□□□ 1
STAG3Q9UJ98 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC21.28■■□□□ 1
STAG3Q9UJ98 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
STAG3Q9UJ98 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
STAG3Q9UJ98 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
STAG3Q9UJ98 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
STAG3Q9UJ98 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
STAG3Q9UJ98 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC21.27■■□□□ 1
STAG3Q9UJ98 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
STAG3Q9UJ98 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC21.27■■□□□ 1
STAG3Q9UJ98 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
STAG3Q9UJ98 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
STAG3Q9UJ98 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
STAG3Q9UJ98 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC21.27■■□□□ 1
STAG3Q9UJ98 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC21.27■■□□□ 1
STAG3Q9UJ98 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC21.27■■□□□ 1
STAG3Q9UJ98 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
STAG3Q9UJ98 FAS-202ENST00000352159 1722 ntTSL 5 BASIC21.27■■□□□ 1
STAG3Q9UJ98 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
STAG3Q9UJ98 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
STAG3Q9UJ98 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC21.27■■□□□ 1
STAG3Q9UJ98 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC21.27■■□□□ 1
STAG3Q9UJ98 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
STAG3Q9UJ98 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
STAG3Q9UJ98 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
STAG3Q9UJ98 HIST2H2BA-201ENST00000412169 381 ntBASIC21.27■■□□□ 1
STAG3Q9UJ98 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC21.27■■□□□ 1
STAG3Q9UJ98 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC21.27■■□□□ 1
STAG3Q9UJ98 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC21.27■■□□□ 1
STAG3Q9UJ98 GCOM2-201ENST00000509133 1104 ntBASIC21.27■■□□□ 1
STAG3Q9UJ98 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC21.27■■□□□ 1
STAG3Q9UJ98 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms