Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLC52A1Q9NWF4 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
SLC52A1Q9NWF4 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC20.97■□□□□ 0.95
SLC52A1Q9NWF4 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC20.97■□□□□ 0.95
SLC52A1Q9NWF4 NAMA-206ENST00000605377 509 ntTSL 5 BASIC20.97■□□□□ 0.95
SLC52A1Q9NWF4 AC090386.2-201ENST00000623010 1039 ntBASIC20.97■□□□□ 0.95
SLC52A1Q9NWF4 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC20.97■□□□□ 0.95
SLC52A1Q9NWF4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC52A1Q9NWF4 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLC52A1Q9NWF4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC52A1Q9NWF4 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLC52A1Q9NWF4 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC52A1Q9NWF4 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLC52A1Q9NWF4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC52A1Q9NWF4 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC20.96■□□□□ 0.95
SLC52A1Q9NWF4 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC52A1Q9NWF4 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC52A1Q9NWF4 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SLC52A1Q9NWF4 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC20.96■□□□□ 0.95
SLC52A1Q9NWF4 AC006504.5-208ENST00000588784 2401 ntBASIC20.96■□□□□ 0.95
SLC52A1Q9NWF4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SLC52A1Q9NWF4 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SLC52A1Q9NWF4 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC20.96■□□□□ 0.95
SLC52A1Q9NWF4 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SLC52A1Q9NWF4 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SLC52A1Q9NWF4 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC20.96■□□□□ 0.95
SLC52A1Q9NWF4 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SLC52A1Q9NWF4 AC024293.1-201ENST00000467930 498 ntBASIC20.96■□□□□ 0.95
SLC52A1Q9NWF4 NSD1-211ENST00000511258 809 ntTSL 3 BASIC20.96■□□□□ 0.95
SLC52A1Q9NWF4 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC20.96■□□□□ 0.95
SLC52A1Q9NWF4 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC20.96■□□□□ 0.95
SLC52A1Q9NWF4 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SLC52A1Q9NWF4 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC20.96■□□□□ 0.95
SLC52A1Q9NWF4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC52A1Q9NWF4 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC52A1Q9NWF4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC52A1Q9NWF4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SLC52A1Q9NWF4 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
SLC52A1Q9NWF4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC20.96■□□□□ 0.95
SLC52A1Q9NWF4 API5-208ENST00000531273 1868 ntTSL 2 BASIC20.96■□□□□ 0.95
SLC52A1Q9NWF4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC52A1Q9NWF4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC52A1Q9NWF4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC52A1Q9NWF4 FTX-216ENST00000638985 1367 ntTSL 5 BASIC20.96■□□□□ 0.95
SLC52A1Q9NWF4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SLC52A1Q9NWF4 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC20.96■□□□□ 0.95
SLC52A1Q9NWF4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC52A1Q9NWF4 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC52A1Q9NWF4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC52A1Q9NWF4 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC52A1Q9NWF4 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
SLC52A1Q9NWF4 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SLC52A1Q9NWF4 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC52A1Q9NWF4 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SLC52A1Q9NWF4 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC20.95■□□□□ 0.94
SLC52A1Q9NWF4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SLC52A1Q9NWF4 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC52A1Q9NWF4 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SLC52A1Q9NWF4 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC20.95■□□□□ 0.94
SLC52A1Q9NWF4 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC52A1Q9NWF4 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC20.95■□□□□ 0.94
SLC52A1Q9NWF4 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC20.95■□□□□ 0.94
SLC52A1Q9NWF4 AC068867.1-201ENST00000559855 150 ntBASIC20.95■□□□□ 0.94
SLC52A1Q9NWF4 MIR4472-1-201ENST00000584349 80 ntBASIC20.95■□□□□ 0.94
SLC52A1Q9NWF4 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC20.95■□□□□ 0.94
SLC52A1Q9NWF4 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC20.95■□□□□ 0.94
SLC52A1Q9NWF4 AC244250.3-201ENST00000620749 366 ntBASIC20.95■□□□□ 0.94
SLC52A1Q9NWF4 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC20.95■□□□□ 0.94
SLC52A1Q9NWF4 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC20.95■□□□□ 0.94
SLC52A1Q9NWF4 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC52A1Q9NWF4 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC52A1Q9NWF4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC52A1Q9NWF4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC52A1Q9NWF4 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC20.95■□□□□ 0.94
SLC52A1Q9NWF4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC52A1Q9NWF4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SLC52A1Q9NWF4 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC20.94■□□□□ 0.94
SLC52A1Q9NWF4 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
SLC52A1Q9NWF4 GSN-206ENST00000394353 2311 ntTSL 2 BASIC20.94■□□□□ 0.94
SLC52A1Q9NWF4 AC136621.1-201ENST00000624017 2304 ntBASIC20.94■□□□□ 0.94
SLC52A1Q9NWF4 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC52A1Q9NWF4 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC20.94■□□□□ 0.94
SLC52A1Q9NWF4 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC20.94■□□□□ 0.94
SLC52A1Q9NWF4 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC52A1Q9NWF4 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC52A1Q9NWF4 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SLC52A1Q9NWF4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC52A1Q9NWF4 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC52A1Q9NWF4 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC52A1Q9NWF4 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SLC52A1Q9NWF4 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC20.94■□□□□ 0.94
SLC52A1Q9NWF4 OR8T1P-201ENST00000421347 918 ntBASIC20.94■□□□□ 0.94
SLC52A1Q9NWF4 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC20.94■□□□□ 0.94
SLC52A1Q9NWF4 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC20.94■□□□□ 0.94
SLC52A1Q9NWF4 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC20.94■□□□□ 0.94
SLC52A1Q9NWF4 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC20.94■□□□□ 0.94
SLC52A1Q9NWF4 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC20.94■□□□□ 0.94
SLC52A1Q9NWF4 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC20.94■□□□□ 0.94
SLC52A1Q9NWF4 ELP5-212ENST00000574255 671 ntTSL 2 BASIC20.94■□□□□ 0.94
SLC52A1Q9NWF4 AC006158.1-201ENST00000610661 249 ntBASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms