Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 MRPL20P1-201ENST00000400819 433 ntBASIC17.93■□□□□ 0.46
RTN4Q9NQC3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 HMGA1P7-201ENST00000406908 502 ntBASIC17.93■□□□□ 0.46
RTN4Q9NQC3 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 PPP2R2DP1-201ENST00000420526 637 ntBASIC17.93■□□□□ 0.46
RTN4Q9NQC3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 AC007919.2-201ENST00000444110 511 ntBASIC17.93■□□□□ 0.46
RTN4Q9NQC3 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 ALDH8A1-201ENST00000265605 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 AP002991.2-201ENST00000623807 2801 ntBASIC17.93■□□□□ 0.46
RTN4Q9NQC3 TBCCD1-205ENST00000446782 2186 ntTSL 2 BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 AC008870.1-201ENST00000566996 3009 ntTSL 2 BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTN4Q9NQC3 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 C10orf67-201ENST00000323327 2799 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 HNRNPDP1-201ENST00000439535 754 ntBASIC17.92■□□□□ 0.46
RTN4Q9NQC3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 AC105339.3-201ENST00000560043 636 ntBASIC17.92■□□□□ 0.46
RTN4Q9NQC3 AC012640.2-201ENST00000561606 901 ntBASIC17.92■□□□□ 0.46
RTN4Q9NQC3 LINC01711-201ENST00000598340 967 ntBASIC17.92■□□□□ 0.46
RTN4Q9NQC3 AC021097.1-201ENST00000607902 574 ntBASIC17.92■□□□□ 0.46
RTN4Q9NQC3 MIR1199-201ENST00000621445 119 ntBASIC17.92■□□□□ 0.46
RTN4Q9NQC3 AC004790.2-201ENST00000623588 572 ntBASIC17.92■□□□□ 0.46
RTN4Q9NQC3 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 AP002414.3-201ENST00000589352 1468 ntBASIC17.92■□□□□ 0.46
RTN4Q9NQC3 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
RTN4Q9NQC3 AC068760.1-201ENST00000493579 1953 ntBASIC17.91■□□□□ 0.46
RTN4Q9NQC3 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC17.91■□□□□ 0.46
RTN4Q9NQC3 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTN4Q9NQC3 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.91■□□□□ 0.46
RTN4Q9NQC3 PCDHA5-203ENST00000614258 4248 ntBASIC17.91■□□□□ 0.46
RTN4Q9NQC3 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTN4Q9NQC3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.91■□□□□ 0.46
RTN4Q9NQC3 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTN4Q9NQC3 PCDHGB8P-202ENST00000507007 2873 ntBASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms