Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 AP000244.1-201ENST00000424582 201 ntBASIC13.53□□□□□ -0.24
CHD8Q9HCK8 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 AC004923.3-201ENST00000527532 355 ntBASIC13.53□□□□□ -0.24
CHD8Q9HCK8 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 AC106785.2-201ENST00000564385 1319 ntBASIC13.53□□□□□ -0.24
CHD8Q9HCK8 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 TPT1P11-201ENST00000458482 498 ntBASIC13.53□□□□□ -0.24
CHD8Q9HCK8 AC025594.1-201ENST00000469533 543 ntBASIC13.53□□□□□ -0.24
CHD8Q9HCK8 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHD8Q9HCK8 AC003102.2-201ENST00000589195 1469 ntBASIC13.53□□□□□ -0.24
CHD8Q9HCK8 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CHD8Q9HCK8 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.52□□□□□ -0.24
CHD8Q9HCK8 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CHD8Q9HCK8 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CHD8Q9HCK8 AIG1-203ENST00000367596 559 ntTSL 2 BASIC13.52□□□□□ -0.24
CHD8Q9HCK8 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC13.52□□□□□ -0.24
CHD8Q9HCK8 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CHD8Q9HCK8 DPY19L2P4-201ENST00000479881 442 ntBASIC13.52□□□□□ -0.24
CHD8Q9HCK8 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CHD8Q9HCK8 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CHD8Q9HCK8 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
CHD8Q9HCK8 MYL6-215ENST00000549566 685 ntTSL 2 BASIC13.52□□□□□ -0.24
CHD8Q9HCK8 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC13.52□□□□□ -0.24
CHD8Q9HCK8 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC13.52□□□□□ -0.24
CHD8Q9HCK8 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC13.52□□□□□ -0.24
CHD8Q9HCK8 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC13.52□□□□□ -0.24
CHD8Q9HCK8 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
CHD8Q9HCK8 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CHD8Q9HCK8 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CHD8Q9HCK8 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CHD8Q9HCK8 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CHD8Q9HCK8 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC13.52□□□□□ -0.25
CHD8Q9HCK8 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CHD8Q9HCK8 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CHD8Q9HCK8 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC13.52□□□□□ -0.25
CHD8Q9HCK8 AC093462.1-201ENST00000621167 1683 ntBASIC13.52□□□□□ -0.25
CHD8Q9HCK8 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CHD8Q9HCK8 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CHD8Q9HCK8 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CHD8Q9HCK8 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CHD8Q9HCK8 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC13.52□□□□□ -0.25
CHD8Q9HCK8 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC13.52□□□□□ -0.25
CHD8Q9HCK8 SNRPD2P2-201ENST00000473818 333 ntBASIC13.52□□□□□ -0.25
CHD8Q9HCK8 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CHD8Q9HCK8 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CHD8Q9HCK8 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CHD8Q9HCK8 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC13.52□□□□□ -0.25
CHD8Q9HCK8 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC13.52□□□□□ -0.25
CHD8Q9HCK8 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CHD8Q9HCK8 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.52□□□□□ -0.25
CHD8Q9HCK8 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
CHD8Q9HCK8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC13.52□□□□□ -0.25
CHD8Q9HCK8 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CHD8Q9HCK8 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHD8Q9HCK8 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms