Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 TMEM14DP-201ENST00000422205 345 ntBASIC13.17□□□□□ -0.3
CDH20Q9HBT6 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 BCRP2-202ENST00000447763 634 ntBASIC13.17□□□□□ -0.3
CDH20Q9HBT6 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 BCRP6-201ENST00000510112 632 ntBASIC13.17□□□□□ -0.3
CDH20Q9HBT6 BCRP7-201ENST00000511549 544 ntBASIC13.17□□□□□ -0.3
CDH20Q9HBT6 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 BTNL10-201ENST00000595971 695 ntBASIC13.17□□□□□ -0.3
CDH20Q9HBT6 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 RPSAP52-203ENST00000622976 1023 ntBASIC13.17□□□□□ -0.3
CDH20Q9HBT6 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 AL603764.1-201ENST00000636452 321 ntBASIC13.17□□□□□ -0.3
CDH20Q9HBT6 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.17□□□□□ -0.3
CDH20Q9HBT6 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 AC018665.1-201ENST00000622927 1362 ntBASIC13.17□□□□□ -0.3
CDH20Q9HBT6 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 MSTO2P-201ENST00000314835 1709 ntBASIC13.16□□□□□ -0.3
CDH20Q9HBT6 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.16□□□□□ -0.3
CDH20Q9HBT6 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 REXO1L2P-201ENST00000425429 2069 ntBASIC13.16□□□□□ -0.3
CDH20Q9HBT6 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 AC005229.1-201ENST00000392885 409 ntBASIC13.16□□□□□ -0.3
CDH20Q9HBT6 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 USP32P1-208ENST00000506594 1164 ntBASIC13.16□□□□□ -0.3
CDH20Q9HBT6 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 AP001889.1-201ENST00000525414 633 ntBASIC13.16□□□□□ -0.3
CDH20Q9HBT6 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 AC145423.3-201ENST00000615987 467 ntBASIC13.16□□□□□ -0.3
CDH20Q9HBT6 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDH20Q9HBT6 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms