Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
S1PR3Q99500 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
S1PR3Q99500 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
S1PR3Q99500 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
S1PR3Q99500 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
S1PR3Q99500 AC018529.2-202ENST00000611482 3087 ntBASIC12.44□□□□□ -0.42
S1PR3Q99500 AC007541.1-201ENST00000570282 1469 ntBASIC12.44□□□□□ -0.42
S1PR3Q99500 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
S1PR3Q99500 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
S1PR3Q99500 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.44□□□□□ -0.42
S1PR3Q99500 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
S1PR3Q99500 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.44□□□□□ -0.42
S1PR3Q99500 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
S1PR3Q99500 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
S1PR3Q99500 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
S1PR3Q99500 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.44□□□□□ -0.42
S1PR3Q99500 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
S1PR3Q99500 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
S1PR3Q99500 AC018442.1-201ENST00000421439 2061 ntBASIC12.44□□□□□ -0.42
S1PR3Q99500 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
S1PR3Q99500 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
S1PR3Q99500 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
S1PR3Q99500 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
S1PR3Q99500 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
S1PR3Q99500 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
S1PR3Q99500 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
S1PR3Q99500 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.44□□□□□ -0.42
S1PR3Q99500 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
S1PR3Q99500 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
S1PR3Q99500 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
S1PR3Q99500 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.43□□□□□ -0.42
S1PR3Q99500 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
S1PR3Q99500 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
S1PR3Q99500 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
S1PR3Q99500 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
S1PR3Q99500 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
S1PR3Q99500 MTHFR-210ENST00000641407 2387 ntBASIC12.43□□□□□ -0.42
S1PR3Q99500 AC093525.8-201ENST00000624099 1342 ntBASIC12.43□□□□□ -0.42
S1PR3Q99500 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
S1PR3Q99500 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.43□□□□□ -0.42
S1PR3Q99500 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.43□□□□□ -0.42
S1PR3Q99500 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.43□□□□□ -0.42
S1PR3Q99500 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
S1PR3Q99500 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
S1PR3Q99500 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
S1PR3Q99500 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.43□□□□□ -0.42
S1PR3Q99500 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
S1PR3Q99500 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
S1PR3Q99500 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
S1PR3Q99500 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
S1PR3Q99500 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
S1PR3Q99500 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.43□□□□□ -0.42
S1PR3Q99500 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
S1PR3Q99500 AC134915.1-201ENST00000426461 574 ntBASIC12.43□□□□□ -0.42
S1PR3Q99500 AL353779.1-201ENST00000434793 351 ntBASIC12.43□□□□□ -0.42
S1PR3Q99500 VDAC1P7-201ENST00000462417 847 ntBASIC12.43□□□□□ -0.42
S1PR3Q99500 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC12.43□□□□□ -0.42
S1PR3Q99500 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.43□□□□□ -0.42
S1PR3Q99500 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.43□□□□□ -0.42
S1PR3Q99500 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.43□□□□□ -0.42
S1PR3Q99500 GREM1-201ENST00000560677 623 ntTSL 4 BASIC12.43□□□□□ -0.42
S1PR3Q99500 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC12.43□□□□□ -0.42
S1PR3Q99500 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC12.43□□□□□ -0.42
S1PR3Q99500 AL132655.2-201ENST00000596276 594 ntBASIC12.43□□□□□ -0.42
S1PR3Q99500 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
S1PR3Q99500 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.43□□□□□ -0.42
S1PR3Q99500 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.43□□□□□ -0.42
S1PR3Q99500 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
S1PR3Q99500 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
S1PR3Q99500 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
S1PR3Q99500 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
S1PR3Q99500 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
S1PR3Q99500 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
S1PR3Q99500 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.43□□□□□ -0.42
S1PR3Q99500 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
S1PR3Q99500 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
S1PR3Q99500 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.43□□□□□ -0.42
S1PR3Q99500 SLC7A15P-201ENST00000424028 1363 ntBASIC12.43□□□□□ -0.42
S1PR3Q99500 AL391825.1-201ENST00000457671 1364 ntBASIC12.43□□□□□ -0.42
S1PR3Q99500 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
S1PR3Q99500 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.43□□□□□ -0.42
S1PR3Q99500 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.42□□□□□ -0.42
S1PR3Q99500 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.42□□□□□ -0.42
S1PR3Q99500 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
S1PR3Q99500 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
S1PR3Q99500 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
S1PR3Q99500 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.42□□□□□ -0.42
S1PR3Q99500 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
S1PR3Q99500 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
S1PR3Q99500 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
S1PR3Q99500 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
S1PR3Q99500 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
S1PR3Q99500 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.42□□□□□ -0.42
S1PR3Q99500 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
S1PR3Q99500 AL158070.2-201ENST00000623713 1621 ntBASIC12.42□□□□□ -0.42
S1PR3Q99500 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
S1PR3Q99500 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
S1PR3Q99500 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.42□□□□□ -0.42
S1PR3Q99500 AC087499.6-201ENST00000411576 835 ntBASIC12.42□□□□□ -0.42
S1PR3Q99500 PIN1P1-201ENST00000412108 996 ntBASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms