Protein–RNA interactions for Protein: Q96RT7

TUBGCP6, Gamma-tubulin complex component 6, humanhuman

Predictions only

Length 1,819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP6Q96RT7 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 AL360270.3-201ENST00000609118 1348 ntBASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TUBGCP6Q96RT7 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TUBGCP6Q96RT7 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC18.73■□□□□ 0.59
TUBGCP6Q96RT7 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TUBGCP6Q96RT7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TUBGCP6Q96RT7 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC18.73■□□□□ 0.59
TUBGCP6Q96RT7 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TUBGCP6Q96RT7 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TUBGCP6Q96RT7 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC18.73■□□□□ 0.59
TUBGCP6Q96RT7 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC18.73■□□□□ 0.59
TUBGCP6Q96RT7 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TUBGCP6Q96RT7 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TUBGCP6Q96RT7 RN7SKP109-201ENST00000410592 316 ntBASIC18.73■□□□□ 0.59
TUBGCP6Q96RT7 TLE1P1-201ENST00000422965 589 ntBASIC18.73■□□□□ 0.59
TUBGCP6Q96RT7 BCAS2P2-201ENST00000425064 674 ntBASIC18.73■□□□□ 0.59
TUBGCP6Q96RT7 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC18.73■□□□□ 0.59
TUBGCP6Q96RT7 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC18.73■□□□□ 0.59
TUBGCP6Q96RT7 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC18.73■□□□□ 0.59
TUBGCP6Q96RT7 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC18.73■□□□□ 0.59
TUBGCP6Q96RT7 MT3-203ENST00000565838 421 ntTSL 3 BASIC18.73■□□□□ 0.59
TUBGCP6Q96RT7 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC18.73■□□□□ 0.59
TUBGCP6Q96RT7 DBP-202ENST00000593500 712 ntTSL 2 BASIC18.73■□□□□ 0.59
TUBGCP6Q96RT7 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC18.73■□□□□ 0.59
TUBGCP6Q96RT7 AC011471.3-201ENST00000623576 402 ntBASIC18.73■□□□□ 0.59
TUBGCP6Q96RT7 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC18.73■□□□□ 0.59
TUBGCP6Q96RT7 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TUBGCP6Q96RT7 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TUBGCP6Q96RT7 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC18.73■□□□□ 0.59
TUBGCP6Q96RT7 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TUBGCP6Q96RT7 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TUBGCP6Q96RT7 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TUBGCP6Q96RT7 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TUBGCP6Q96RT7 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TUBGCP6Q96RT7 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TUBGCP6Q96RT7 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC18.72■□□□□ 0.59
TUBGCP6Q96RT7 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TUBGCP6Q96RT7 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC18.72■□□□□ 0.59
TUBGCP6Q96RT7 AC084752.1-201ENST00000509766 622 ntBASIC18.72■□□□□ 0.59
TUBGCP6Q96RT7 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC18.72■□□□□ 0.59
TUBGCP6Q96RT7 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC18.72■□□□□ 0.59
TUBGCP6Q96RT7 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC18.72■□□□□ 0.59
TUBGCP6Q96RT7 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TUBGCP6Q96RT7 FGD5P1-202ENST00000614866 2498 ntBASIC18.72■□□□□ 0.59
TUBGCP6Q96RT7 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TUBGCP6Q96RT7 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TUBGCP6Q96RT7 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TUBGCP6Q96RT7 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TUBGCP6Q96RT7 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TUBGCP6Q96RT7 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TUBGCP6Q96RT7 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
TUBGCP6Q96RT7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.72■□□□□ 0.59
TUBGCP6Q96RT7 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TUBGCP6Q96RT7 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC18.72■□□□□ 0.59
TUBGCP6Q96RT7 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TUBGCP6Q96RT7 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC18.72■□□□□ 0.59
TUBGCP6Q96RT7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TUBGCP6Q96RT7 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TUBGCP6Q96RT7 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TUBGCP6Q96RT7 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC18.72■□□□□ 0.59
TUBGCP6Q96RT7 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC18.72■□□□□ 0.59
TUBGCP6Q96RT7 GCOM2-201ENST00000509133 1104 ntBASIC18.72■□□□□ 0.59
TUBGCP6Q96RT7 RNA5SP417-201ENST00000516459 108 ntBASIC18.72■□□□□ 0.59
TUBGCP6Q96RT7 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TUBGCP6Q96RT7 MRPL37P1-201ENST00000592451 1337 ntBASIC18.72■□□□□ 0.59
TUBGCP6Q96RT7 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TUBGCP6Q96RT7 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TUBGCP6Q96RT7 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC18.71■□□□□ 0.59
TUBGCP6Q96RT7 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TUBGCP6Q96RT7 ANKRD26P3-201ENST00000454044 2748 ntBASIC18.71■□□□□ 0.59
TUBGCP6Q96RT7 TPO-203ENST00000346956 2923 ntTSL 5 BASIC18.71■□□□□ 0.59
TUBGCP6Q96RT7 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.71■□□□□ 0.59
TUBGCP6Q96RT7 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TUBGCP6Q96RT7 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TUBGCP6Q96RT7 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC18.71■□□□□ 0.59
TUBGCP6Q96RT7 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TUBGCP6Q96RT7 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC18.71■□□□□ 0.59
TUBGCP6Q96RT7 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TUBGCP6Q96RT7 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TUBGCP6Q96RT7 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TUBGCP6Q96RT7 UROS-201ENST00000368774 744 ntTSL 2 BASIC18.71■□□□□ 0.59
TUBGCP6Q96RT7 Z69890.1-201ENST00000382990 339 ntBASIC18.71■□□□□ 0.59
TUBGCP6Q96RT7 HLA-DMA-203ENST00000395305 777 ntBASIC18.71■□□□□ 0.59
TUBGCP6Q96RT7 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TUBGCP6Q96RT7 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC18.71■□□□□ 0.59
TUBGCP6Q96RT7 AC106047.2-201ENST00000511723 743 ntBASIC18.71■□□□□ 0.59
TUBGCP6Q96RT7 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC18.71■□□□□ 0.59
TUBGCP6Q96RT7 AC138701.2-201ENST00000553634 226 ntBASIC18.71■□□□□ 0.59
TUBGCP6Q96RT7 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
TUBGCP6Q96RT7 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
TUBGCP6Q96RT7 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC18.71■□□□□ 0.59
TUBGCP6Q96RT7 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TUBGCP6Q96RT7 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC18.71■□□□□ 0.59
TUBGCP6Q96RT7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TUBGCP6Q96RT7 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC18.71■□□□□ 0.59
TUBGCP6Q96RT7 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
TUBGCP6Q96RT7 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC18.71■□□□□ 0.59
TUBGCP6Q96RT7 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms