Protein–RNA interactions for Protein: Q96D46

NMD3, 60S ribosomal export protein NMD3, humanhuman

Known RBP Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3Q96D46 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NMD3Q96D46 AC114271.1-201ENST00000612689 2813 ntBASIC14.31□□□□□ -0.12
NMD3Q96D46 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NMD3Q96D46 AMT-221ENST00000538581 2038 ntTSL 2 BASIC14.31□□□□□ -0.12
NMD3Q96D46 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NMD3Q96D46 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NMD3Q96D46 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC14.31□□□□□ -0.12
NMD3Q96D46 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NMD3Q96D46 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NMD3Q96D46 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
NMD3Q96D46 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.31□□□□□ -0.12
NMD3Q96D46 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NMD3Q96D46 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NMD3Q96D46 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NMD3Q96D46 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.31□□□□□ -0.12
NMD3Q96D46 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NMD3Q96D46 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.31□□□□□ -0.12
NMD3Q96D46 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.31□□□□□ -0.12
NMD3Q96D46 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.31□□□□□ -0.12
NMD3Q96D46 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.31□□□□□ -0.12
NMD3Q96D46 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.31□□□□□ -0.12
NMD3Q96D46 AC022145.2-201ENST00000598203 171 ntBASIC14.31□□□□□ -0.12
NMD3Q96D46 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.31□□□□□ -0.12
NMD3Q96D46 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
NMD3Q96D46 AL513210.1-201ENST00000629608 234 ntBASIC14.31□□□□□ -0.12
NMD3Q96D46 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NMD3Q96D46 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NMD3Q96D46 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NMD3Q96D46 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NMD3Q96D46 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NMD3Q96D46 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.31□□□□□ -0.12
NMD3Q96D46 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.31□□□□□ -0.12
NMD3Q96D46 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC14.31□□□□□ -0.12
NMD3Q96D46 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
NMD3Q96D46 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NMD3Q96D46 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NMD3Q96D46 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
NMD3Q96D46 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
NMD3Q96D46 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NMD3Q96D46 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.31□□□□□ -0.12
NMD3Q96D46 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NMD3Q96D46 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NMD3Q96D46 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NMD3Q96D46 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NMD3Q96D46 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
NMD3Q96D46 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC14.3□□□□□ -0.12
NMD3Q96D46 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.3□□□□□ -0.12
NMD3Q96D46 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
NMD3Q96D46 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NMD3Q96D46 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NMD3Q96D46 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
NMD3Q96D46 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NMD3Q96D46 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
NMD3Q96D46 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.3□□□□□ -0.12
NMD3Q96D46 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NMD3Q96D46 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NMD3Q96D46 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NMD3Q96D46 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NMD3Q96D46 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NMD3Q96D46 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NMD3Q96D46 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.3□□□□□ -0.12
NMD3Q96D46 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.3□□□□□ -0.12
NMD3Q96D46 AL592309.1-201ENST00000443127 649 ntBASIC14.3□□□□□ -0.12
NMD3Q96D46 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NMD3Q96D46 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.3□□□□□ -0.12
NMD3Q96D46 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
NMD3Q96D46 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
NMD3Q96D46 MIR497HG-202ENST00000572453 3838 ntBASIC14.3□□□□□ -0.12
NMD3Q96D46 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.3□□□□□ -0.12
NMD3Q96D46 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.3□□□□□ -0.12
NMD3Q96D46 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NMD3Q96D46 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.3□□□□□ -0.12
NMD3Q96D46 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NMD3Q96D46 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NMD3Q96D46 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
NMD3Q96D46 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
NMD3Q96D46 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NMD3Q96D46 WASH3P-207ENST00000560956 1394 ntBASIC14.3□□□□□ -0.12
NMD3Q96D46 FO538757.1-201ENST00000623083 1397 ntBASIC14.3□□□□□ -0.12
NMD3Q96D46 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14.3□□□□□ -0.12
NMD3Q96D46 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NMD3Q96D46 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NMD3Q96D46 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.3□□□□□ -0.12
NMD3Q96D46 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NMD3Q96D46 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NMD3Q96D46 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC14.3□□□□□ -0.12
NMD3Q96D46 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.3□□□□□ -0.12
NMD3Q96D46 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.3□□□□□ -0.12
NMD3Q96D46 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
NMD3Q96D46 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.29□□□□□ -0.12
NMD3Q96D46 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NMD3Q96D46 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NMD3Q96D46 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NMD3Q96D46 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.29□□□□□ -0.12
NMD3Q96D46 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.29□□□□□ -0.12
NMD3Q96D46 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC14.29□□□□□ -0.12
NMD3Q96D46 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NMD3Q96D46 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NMD3Q96D46 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NMD3Q96D46 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms