Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
TMEM54Q969K7 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM54Q969K7 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.16□□□□□ -0.3
TMEM54Q969K7 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM54Q969K7 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM54Q969K7 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM54Q969K7 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.16□□□□□ -0.3
TMEM54Q969K7 BX640514.1-201ENST00000583223 1918 ntBASIC13.16□□□□□ -0.3
TMEM54Q969K7 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM54Q969K7 AC004945.1-201ENST00000416738 983 ntBASIC13.16□□□□□ -0.3
TMEM54Q969K7 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TMEM54Q969K7 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM54Q969K7 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM54Q969K7 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.16□□□□□ -0.3
TMEM54Q969K7 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.16□□□□□ -0.3
TMEM54Q969K7 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.16□□□□□ -0.3
TMEM54Q969K7 AP000812.2-201ENST00000538934 718 ntBASIC13.16□□□□□ -0.3
TMEM54Q969K7 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.16□□□□□ -0.3
TMEM54Q969K7 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.16□□□□□ -0.3
TMEM54Q969K7 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.16□□□□□ -0.3
TMEM54Q969K7 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.16□□□□□ -0.3
TMEM54Q969K7 OR10B1P-201ENST00000601666 907 ntBASIC13.16□□□□□ -0.3
TMEM54Q969K7 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM54Q969K7 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TMEM54Q969K7 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM54Q969K7 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM54Q969K7 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.16□□□□□ -0.3
TMEM54Q969K7 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM54Q969K7 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM54Q969K7 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.16□□□□□ -0.3
TMEM54Q969K7 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM54Q969K7 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM54Q969K7 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM54Q969K7 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.16□□□□□ -0.3
TMEM54Q969K7 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM54Q969K7 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM54Q969K7 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM54Q969K7 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM54Q969K7 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM54Q969K7 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM54Q969K7 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM54Q969K7 INTS4P1-203ENST00000641008 3683 ntBASIC13.16□□□□□ -0.3
TMEM54Q969K7 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TMEM54Q969K7 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM54Q969K7 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM54Q969K7 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.15□□□□□ -0.3
TMEM54Q969K7 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
TMEM54Q969K7 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM54Q969K7 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM54Q969K7 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
TMEM54Q969K7 AC023908.3-201ENST00000564211 3047 ntBASIC13.15□□□□□ -0.3
TMEM54Q969K7 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM54Q969K7 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.15□□□□□ -0.3
TMEM54Q969K7 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM54Q969K7 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM54Q969K7 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM54Q969K7 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.15□□□□□ -0.3
TMEM54Q969K7 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
TMEM54Q969K7 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM54Q969K7 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM54Q969K7 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
TMEM54Q969K7 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
TMEM54Q969K7 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.15□□□□□ -0.3
TMEM54Q969K7 CROCCP4-201ENST00000457096 498 ntBASIC13.15□□□□□ -0.3
TMEM54Q969K7 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.15□□□□□ -0.3
TMEM54Q969K7 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.15□□□□□ -0.3
TMEM54Q969K7 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.15□□□□□ -0.3
TMEM54Q969K7 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.15□□□□□ -0.3
TMEM54Q969K7 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.15□□□□□ -0.3
TMEM54Q969K7 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.15□□□□□ -0.3
TMEM54Q969K7 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
TMEM54Q969K7 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.15□□□□□ -0.3
TMEM54Q969K7 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.15□□□□□ -0.3
TMEM54Q969K7 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
TMEM54Q969K7 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM54Q969K7 AP001002.3-201ENST00000623482 206 ntBASIC13.15□□□□□ -0.3
TMEM54Q969K7 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.15□□□□□ -0.3
TMEM54Q969K7 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM54Q969K7 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM54Q969K7 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM54Q969K7 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM54Q969K7 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM54Q969K7 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM54Q969K7 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM54Q969K7 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
TMEM54Q969K7 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM54Q969K7 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
TMEM54Q969K7 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
TMEM54Q969K7 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.15□□□□□ -0.3
TMEM54Q969K7 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
TMEM54Q969K7 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
TMEM54Q969K7 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.15□□□□□ -0.31
TMEM54Q969K7 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM54Q969K7 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM54Q969K7 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM54Q969K7 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.14□□□□□ -0.31
TMEM54Q969K7 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM54Q969K7 AC009093.2-202ENST00000620513 2079 ntBASIC13.14□□□□□ -0.31
TMEM54Q969K7 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM54Q969K7 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms