Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 RNA5SP486-201ENST00000515961 83 ntBASIC15.92■□□□□ 0.14
SHC3Q92529 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.92■□□□□ 0.14
SHC3Q92529 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.92■□□□□ 0.14
SHC3Q92529 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.92■□□□□ 0.14
SHC3Q92529 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.92■□□□□ 0.14
SHC3Q92529 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.92■□□□□ 0.14
SHC3Q92529 AL022328.1-201ENST00000610050 478 ntBASIC15.92■□□□□ 0.14
SHC3Q92529 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.92■□□□□ 0.14
SHC3Q92529 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHC3Q92529 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
SHC3Q92529 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHC3Q92529 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.92■□□□□ 0.14
SHC3Q92529 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SHC3Q92529 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHC3Q92529 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHC3Q92529 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SHC3Q92529 AC152010.1-201ENST00000415779 2006 ntBASIC15.92■□□□□ 0.14
SHC3Q92529 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SHC3Q92529 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHC3Q92529 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHC3Q92529 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SHC3Q92529 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.91■□□□□ 0.14
SHC3Q92529 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHC3Q92529 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHC3Q92529 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHC3Q92529 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHC3Q92529 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHC3Q92529 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.91■□□□□ 0.14
SHC3Q92529 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHC3Q92529 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHC3Q92529 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHC3Q92529 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.91■□□□□ 0.14
SHC3Q92529 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.91■□□□□ 0.14
SHC3Q92529 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.91■□□□□ 0.14
SHC3Q92529 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
SHC3Q92529 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.91■□□□□ 0.14
SHC3Q92529 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SHC3Q92529 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHC3Q92529 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHC3Q92529 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHC3Q92529 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHC3Q92529 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHC3Q92529 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SHC3Q92529 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SHC3Q92529 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHC3Q92529 NME2P1-201ENST00000426182 414 ntBASIC15.91■□□□□ 0.14
SHC3Q92529 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SHC3Q92529 FTH1P14-201ENST00000482930 551 ntBASIC15.91■□□□□ 0.14
SHC3Q92529 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SHC3Q92529 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.91■□□□□ 0.14
SHC3Q92529 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SHC3Q92529 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.91■□□□□ 0.14
SHC3Q92529 AC103988.2-201ENST00000561804 725 ntBASIC15.91■□□□□ 0.14
SHC3Q92529 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.91■□□□□ 0.14
SHC3Q92529 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SHC3Q92529 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHC3Q92529 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.91■□□□□ 0.14
SHC3Q92529 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.91■□□□□ 0.14
SHC3Q92529 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.91■□□□□ 0.14
SHC3Q92529 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHC3Q92529 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHC3Q92529 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.91■□□□□ 0.14
SHC3Q92529 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.91■□□□□ 0.14
SHC3Q92529 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHC3Q92529 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
SHC3Q92529 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SHC3Q92529 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.91■□□□□ 0.14
SHC3Q92529 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHC3Q92529 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHC3Q92529 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
SHC3Q92529 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHC3Q92529 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.91■□□□□ 0.14
SHC3Q92529 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHC3Q92529 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SHC3Q92529 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SHC3Q92529 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SHC3Q92529 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.9■□□□□ 0.14
SHC3Q92529 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHC3Q92529 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHC3Q92529 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SHC3Q92529 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SHC3Q92529 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHC3Q92529 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SHC3Q92529 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHC3Q92529 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.9■□□□□ 0.14
SHC3Q92529 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SHC3Q92529 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SHC3Q92529 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHC3Q92529 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.9■□□□□ 0.14
SHC3Q92529 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHC3Q92529 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHC3Q92529 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
SHC3Q92529 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
SHC3Q92529 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHC3Q92529 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.9■□□□□ 0.14
SHC3Q92529 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SHC3Q92529 CD8B2-202ENST00000417670 633 ntBASIC15.9■□□□□ 0.14
SHC3Q92529 FAM197Y7-201ENST00000432892 766 ntBASIC15.9■□□□□ 0.14
SHC3Q92529 C2orf27AP3-201ENST00000434123 579 ntBASIC15.9■□□□□ 0.14
SHC3Q92529 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms