Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 USP32P1-208ENST00000506594 1164 ntBASIC13.16□□□□□ -0.3
CPEB3Q8NE35 AC106760.1-201ENST00000508690 800 ntBASIC13.16□□□□□ -0.3
CPEB3Q8NE35 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 AL603764.1-201ENST00000636452 321 ntBASIC13.16□□□□□ -0.3
CPEB3Q8NE35 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 AC018442.1-201ENST00000421439 2061 ntBASIC13.16□□□□□ -0.3
CPEB3Q8NE35 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CPEB3Q8NE35 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 OR2I1P-210ENST00000642037 4691 ntBASIC13.15□□□□□ -0.3
CPEB3Q8NE35 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 AC005229.1-201ENST00000392885 409 ntBASIC13.15□□□□□ -0.3
CPEB3Q8NE35 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 BCRP2-202ENST00000447763 634 ntBASIC13.15□□□□□ -0.3
CPEB3Q8NE35 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 BCRP6-201ENST00000510112 632 ntBASIC13.15□□□□□ -0.3
CPEB3Q8NE35 BCRP7-201ENST00000511549 544 ntBASIC13.15□□□□□ -0.3
CPEB3Q8NE35 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 BTNL10-201ENST00000595971 695 ntBASIC13.15□□□□□ -0.3
CPEB3Q8NE35 AC004466.1-201ENST00000599515 1080 ntBASIC13.15□□□□□ -0.3
CPEB3Q8NE35 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.15□□□□□ -0.3
CPEB3Q8NE35 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms