Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CFAP43Q8NDM7 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
CFAP43Q8NDM7 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC22.76■■□□□ 1.23
CFAP43Q8NDM7 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CFAP43Q8NDM7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CFAP43Q8NDM7 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CFAP43Q8NDM7 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CFAP43Q8NDM7 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CFAP43Q8NDM7 HLA-DMA-203ENST00000395305 777 ntBASIC22.76■■□□□ 1.23
CFAP43Q8NDM7 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC22.76■■□□□ 1.23
CFAP43Q8NDM7 MT3-203ENST00000565838 421 ntTSL 3 BASIC22.76■■□□□ 1.23
CFAP43Q8NDM7 AC018695.6-201ENST00000614011 534 ntBASIC22.76■■□□□ 1.23
CFAP43Q8NDM7 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CFAP43Q8NDM7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC22.76■■□□□ 1.23
CFAP43Q8NDM7 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC22.76■■□□□ 1.23
CFAP43Q8NDM7 AL354702.1-201ENST00000442006 1960 ntBASIC22.76■■□□□ 1.23
CFAP43Q8NDM7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
CFAP43Q8NDM7 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
CFAP43Q8NDM7 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
CFAP43Q8NDM7 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC22.75■■□□□ 1.23
CFAP43Q8NDM7 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CFAP43Q8NDM7 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CFAP43Q8NDM7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CFAP43Q8NDM7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
CFAP43Q8NDM7 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
CFAP43Q8NDM7 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CFAP43Q8NDM7 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC22.75■■□□□ 1.23
CFAP43Q8NDM7 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC22.75■■□□□ 1.23
CFAP43Q8NDM7 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC22.75■■□□□ 1.23
CFAP43Q8NDM7 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC22.75■■□□□ 1.23
CFAP43Q8NDM7 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC22.75■■□□□ 1.23
CFAP43Q8NDM7 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CFAP43Q8NDM7 AHCYP4-201ENST00000419201 1315 ntBASIC22.75■■□□□ 1.23
CFAP43Q8NDM7 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CFAP43Q8NDM7 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
CFAP43Q8NDM7 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC22.75■■□□□ 1.23
CFAP43Q8NDM7 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC22.75■■□□□ 1.23
CFAP43Q8NDM7 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
CFAP43Q8NDM7 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC22.75■■□□□ 1.23
CFAP43Q8NDM7 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CFAP43Q8NDM7 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CFAP43Q8NDM7 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CFAP43Q8NDM7 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC22.75■■□□□ 1.23
CFAP43Q8NDM7 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CFAP43Q8NDM7 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CFAP43Q8NDM7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
CFAP43Q8NDM7 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
CFAP43Q8NDM7 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 AC093909.3-201ENST00000504783 336 ntBASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 PGAM1P12-201ENST00000505622 748 ntBASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 AC003686.1-201ENST00000550956 1034 ntBASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 GUSBP10-201ENST00000417412 665 ntBASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 FAM86KP-201ENST00000509817 987 ntBASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 AC138701.2-201ENST00000553634 226 ntBASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 AC007952.4-201ENST00000573866 637 ntBASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
CFAP43Q8NDM7 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC22.73■■□□□ 1.23
CFAP43Q8NDM7 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CFAP43Q8NDM7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CFAP43Q8NDM7 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CFAP43Q8NDM7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC22.73■■□□□ 1.23
CFAP43Q8NDM7 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
CFAP43Q8NDM7 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC22.73■■□□□ 1.23
CFAP43Q8NDM7 ZNF436-AS1-201ENST00000335648 2547 ntBASIC22.73■■□□□ 1.23
CFAP43Q8NDM7 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC22.73■■□□□ 1.23
CFAP43Q8NDM7 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
CFAP43Q8NDM7 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CFAP43Q8NDM7 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CFAP43Q8NDM7 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms