Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
C3orf56Q8N813 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
C3orf56Q8N813 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
C3orf56Q8N813 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC11.78□□□□□ -0.52
C3orf56Q8N813 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
C3orf56Q8N813 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
C3orf56Q8N813 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC11.78□□□□□ -0.52
C3orf56Q8N813 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC11.78□□□□□ -0.52
C3orf56Q8N813 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC11.78□□□□□ -0.52
C3orf56Q8N813 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
C3orf56Q8N813 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
C3orf56Q8N813 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
C3orf56Q8N813 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC11.78□□□□□ -0.52
C3orf56Q8N813 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
C3orf56Q8N813 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
C3orf56Q8N813 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
C3orf56Q8N813 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
C3orf56Q8N813 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
C3orf56Q8N813 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC11.77□□□□□ -0.52
C3orf56Q8N813 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
C3orf56Q8N813 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
C3orf56Q8N813 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
C3orf56Q8N813 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.52
C3orf56Q8N813 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
C3orf56Q8N813 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
C3orf56Q8N813 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
C3orf56Q8N813 AL645608.8-201ENST00000606034 2086 ntBASIC11.77□□□□□ -0.52
C3orf56Q8N813 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
C3orf56Q8N813 CICP14-201ENST00000629111 2732 ntBASIC11.77□□□□□ -0.52
C3orf56Q8N813 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
C3orf56Q8N813 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC11.77□□□□□ -0.52
C3orf56Q8N813 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
C3orf56Q8N813 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
C3orf56Q8N813 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
C3orf56Q8N813 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
C3orf56Q8N813 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
C3orf56Q8N813 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
C3orf56Q8N813 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
C3orf56Q8N813 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
C3orf56Q8N813 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
C3orf56Q8N813 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
C3orf56Q8N813 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
C3orf56Q8N813 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC11.77□□□□□ -0.53
C3orf56Q8N813 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
C3orf56Q8N813 EIF3FP3-201ENST00000434851 1086 ntBASIC11.77□□□□□ -0.53
C3orf56Q8N813 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC11.77□□□□□ -0.53
C3orf56Q8N813 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
C3orf56Q8N813 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
C3orf56Q8N813 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
C3orf56Q8N813 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC11.77□□□□□ -0.53
C3orf56Q8N813 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC11.77□□□□□ -0.53
C3orf56Q8N813 AP003398.1-201ENST00000531124 318 ntBASIC11.77□□□□□ -0.53
C3orf56Q8N813 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC11.77□□□□□ -0.53
C3orf56Q8N813 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC11.77□□□□□ -0.53
C3orf56Q8N813 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC11.77□□□□□ -0.53
C3orf56Q8N813 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
C3orf56Q8N813 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC11.77□□□□□ -0.53
C3orf56Q8N813 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC11.77□□□□□ -0.53
C3orf56Q8N813 AC008805.1-201ENST00000590892 364 ntBASIC11.77□□□□□ -0.53
C3orf56Q8N813 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC11.77□□□□□ -0.53
C3orf56Q8N813 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC11.77□□□□□ -0.53
C3orf56Q8N813 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
C3orf56Q8N813 AL132994.2-201ENST00000603120 687 ntBASIC11.77□□□□□ -0.53
C3orf56Q8N813 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
C3orf56Q8N813 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
C3orf56Q8N813 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
C3orf56Q8N813 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
C3orf56Q8N813 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
C3orf56Q8N813 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
C3orf56Q8N813 AMT-233ENST00000636522 1620 ntTSL 2 BASIC11.77□□□□□ -0.53
C3orf56Q8N813 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
C3orf56Q8N813 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
C3orf56Q8N813 FKBP4P6-201ENST00000457486 1332 ntBASIC11.77□□□□□ -0.53
C3orf56Q8N813 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
C3orf56Q8N813 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
C3orf56Q8N813 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC11.77□□□□□ -0.53
C3orf56Q8N813 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC11.77□□□□□ -0.53
C3orf56Q8N813 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
C3orf56Q8N813 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
C3orf56Q8N813 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
C3orf56Q8N813 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC11.77□□□□□ -0.53
C3orf56Q8N813 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC11.77□□□□□ -0.53
C3orf56Q8N813 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC11.77□□□□□ -0.53
C3orf56Q8N813 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
C3orf56Q8N813 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC11.77□□□□□ -0.53
C3orf56Q8N813 AC055811.4-201ENST00000624039 1754 ntBASIC11.77□□□□□ -0.53
C3orf56Q8N813 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
C3orf56Q8N813 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC11.76□□□□□ -0.53
C3orf56Q8N813 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
C3orf56Q8N813 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
C3orf56Q8N813 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
C3orf56Q8N813 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
C3orf56Q8N813 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
C3orf56Q8N813 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC11.76□□□□□ -0.53
C3orf56Q8N813 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC11.76□□□□□ -0.53
C3orf56Q8N813 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC11.76□□□□□ -0.53
C3orf56Q8N813 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC11.76□□□□□ -0.53
C3orf56Q8N813 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
C3orf56Q8N813 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC11.76□□□□□ -0.53
C3orf56Q8N813 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms