Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CHPFQ8IZ52 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHPFQ8IZ52 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHPFQ8IZ52 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.26■□□□□ 0.03
CHPFQ8IZ52 AP000593.2-201ENST00000542775 1433 ntBASIC15.26■□□□□ 0.03
CHPFQ8IZ52 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 AC136621.1-201ENST00000624017 2304 ntBASIC15.25■□□□□ 0.03
CHPFQ8IZ52 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 AL136301.1-201ENST00000615830 422 ntBASIC15.25■□□□□ 0.03
CHPFQ8IZ52 AL023803.2-201ENST00000620080 638 ntBASIC15.25■□□□□ 0.03
CHPFQ8IZ52 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 AC006486.2-201ENST00000624246 2199 ntBASIC15.25■□□□□ 0.03
CHPFQ8IZ52 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.25■□□□□ 0.03
CHPFQ8IZ52 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 MIR769-201ENST00000390225 118 ntBASIC15.24■□□□□ 0.03
CHPFQ8IZ52 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 AC016700.1-201ENST00000429424 312 ntBASIC15.24■□□□□ 0.03
CHPFQ8IZ52 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 RERG-205ENST00000537647 935 ntTSL 2 BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 AC106872.11-201ENST00000605838 421 ntBASIC15.24■□□□□ 0.03
CHPFQ8IZ52 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 AC002472.3-201ENST00000640124 621 ntBASIC15.24■□□□□ 0.03
CHPFQ8IZ52 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 AC087481.3-201ENST00000602886 1894 ntBASIC15.24■□□□□ 0.03
CHPFQ8IZ52 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHPFQ8IZ52 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms