Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 AC018665.1-201ENST00000622927 1362 ntBASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 KRT8P35-201ENST00000483942 1338 ntBASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 AC023908.3-201ENST00000564211 3047 ntBASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 MSTO2P-201ENST00000314835 1709 ntBASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 ACTBP8-201ENST00000403258 1108 ntBASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 AC022137.2-201ENST00000503482 481 ntBASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 AC040160.2-201ENST00000623816 1675 ntBASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC116Q8IYX3 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC116Q8IYX3 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CCDC116Q8IYX3 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC116Q8IYX3 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC116Q8IYX3 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC116Q8IYX3 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC116Q8IYX3 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC116Q8IYX3 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC116Q8IYX3 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC116Q8IYX3 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC116Q8IYX3 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC116Q8IYX3 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC116Q8IYX3 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC116Q8IYX3 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
CCDC116Q8IYX3 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.18□□□□□ -0.14
CCDC116Q8IYX3 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CCDC116Q8IYX3 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC116Q8IYX3 AC098614.1-201ENST00000368528 745 ntBASIC14.18□□□□□ -0.14
CCDC116Q8IYX3 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.18□□□□□ -0.14
CCDC116Q8IYX3 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC116Q8IYX3 RN7SL752P-201ENST00000463779 287 ntBASIC14.18□□□□□ -0.14
CCDC116Q8IYX3 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC116Q8IYX3 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.18□□□□□ -0.14
CCDC116Q8IYX3 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CCDC116Q8IYX3 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.18□□□□□ -0.14
CCDC116Q8IYX3 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC116Q8IYX3 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC116Q8IYX3 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.18□□□□□ -0.14
CCDC116Q8IYX3 AC010319.3-201ENST00000597028 470 ntBASIC14.18□□□□□ -0.14
CCDC116Q8IYX3 AC137695.1-201ENST00000604126 489 ntBASIC14.18□□□□□ -0.14
CCDC116Q8IYX3 AC025048.6-201ENST00000634326 1161 ntBASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms