Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.79■□□□□ 0.12
SCN4BQ8IWT1 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCN4BQ8IWT1 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SCN4BQ8IWT1 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCN4BQ8IWT1 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCN4BQ8IWT1 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.79■□□□□ 0.12
SCN4BQ8IWT1 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.79■□□□□ 0.12
SCN4BQ8IWT1 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCN4BQ8IWT1 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SCN4BQ8IWT1 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 AL138725.1-201ENST00000407347 1314 ntBASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 AC006486.2-201ENST00000624246 2199 ntBASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 RN7SKP230-201ENST00000365642 335 ntBASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 AC006033.1-201ENST00000440505 426 ntBASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.78■□□□□ 0.12
SCN4BQ8IWT1 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.77■□□□□ 0.12
SCN4BQ8IWT1 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.77■□□□□ 0.12
SCN4BQ8IWT1 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SCN4BQ8IWT1 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SCN4BQ8IWT1 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SCN4BQ8IWT1 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SCN4BQ8IWT1 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SCN4BQ8IWT1 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SCN4BQ8IWT1 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SCN4BQ8IWT1 ACE3P-201ENST00000423435 1973 ntBASIC15.77■□□□□ 0.12
SCN4BQ8IWT1 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SCN4BQ8IWT1 ZBED1P1-201ENST00000502364 1930 ntBASIC15.77■□□□□ 0.12
SCN4BQ8IWT1 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SCN4BQ8IWT1 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
SCN4BQ8IWT1 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SCN4BQ8IWT1 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SCN4BQ8IWT1 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SCN4BQ8IWT1 MIR1247-201ENST00000408206 136 ntBASIC15.77■□□□□ 0.12
SCN4BQ8IWT1 MIR663B-201ENST00000408361 115 ntBASIC15.77■□□□□ 0.12
SCN4BQ8IWT1 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.77■□□□□ 0.12
SCN4BQ8IWT1 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.77■□□□□ 0.12
SCN4BQ8IWT1 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SCN4BQ8IWT1 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.77■□□□□ 0.12
SCN4BQ8IWT1 MIR3615-201ENST00000581999 87 ntBASIC15.77■□□□□ 0.12
SCN4BQ8IWT1 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.77■□□□□ 0.12
SCN4BQ8IWT1 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.77■□□□□ 0.12
SCN4BQ8IWT1 AL358472.3-201ENST00000608147 415 ntBASIC15.77■□□□□ 0.12
SCN4BQ8IWT1 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.77■□□□□ 0.12
SCN4BQ8IWT1 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SCN4BQ8IWT1 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.77■□□□□ 0.12
SCN4BQ8IWT1 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SCN4BQ8IWT1 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SCN4BQ8IWT1 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.77■□□□□ 0.12
SCN4BQ8IWT1 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
SCN4BQ8IWT1 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
SCN4BQ8IWT1 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.77■□□□□ 0.11
SCN4BQ8IWT1 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.11
SCN4BQ8IWT1 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
SCN4BQ8IWT1 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.77■□□□□ 0.11
SCN4BQ8IWT1 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SCN4BQ8IWT1 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.77■□□□□ 0.11
SCN4BQ8IWT1 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
SCN4BQ8IWT1 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
SCN4BQ8IWT1 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms