Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 AC015818.8-201ENST00000587907 1519 ntBASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 MTX1P1-201ENST00000440904 838 ntBASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 CHMP1AP1-201ENST00000445563 662 ntBASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 FAM86HP-204ENST00000513466 959 ntBASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 MIR4683-201ENST00000579659 81 ntBASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 AC244157.2-201ENST00000616239 1006 ntBASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 AC009093.2-202ENST00000620513 2079 ntBASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
LRRTM4Q86VH4 LINC01101-201ENST00000622953 1884 ntBASIC14.67□□□□□ -0.06
LRRTM4Q86VH4 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
LRRTM4Q86VH4 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRTM4Q86VH4 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.67□□□□□ -0.06
LRRTM4Q86VH4 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.67□□□□□ -0.06
LRRTM4Q86VH4 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LRRTM4Q86VH4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRTM4Q86VH4 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
LRRTM4Q86VH4 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRTM4Q86VH4 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LRRTM4Q86VH4 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRTM4Q86VH4 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.67□□□□□ -0.06
LRRTM4Q86VH4 BTBD6P1-201ENST00000412176 1267 ntBASIC14.67□□□□□ -0.06
LRRTM4Q86VH4 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
LRRTM4Q86VH4 HIST2H2BB-201ENST00000449108 381 ntBASIC14.67□□□□□ -0.06
LRRTM4Q86VH4 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.67□□□□□ -0.06
LRRTM4Q86VH4 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
LRRTM4Q86VH4 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.67□□□□□ -0.06
LRRTM4Q86VH4 RN7SL219P-201ENST00000582872 296 ntBASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms