Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
UBE3BQ7Z3V4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBE3BQ7Z3V4 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 AL008718.2-201ENST00000609206 1313 ntBASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 MBLAC2-202ENST00000514906 1936 ntBASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 SKA2-202ENST00000437036 625 ntTSL 2 BASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 VDAC1P1-201ENST00000439229 848 ntBASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 SPTLC1P5-201ENST00000450718 252 ntBASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 AC090164.2-201ENST00000611487 516 ntBASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 MIR6720-201ENST00000611664 98 ntBASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE3BQ7Z3V4 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 TUBBP5-203ENST00000508529 1334 ntBASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 KRTAP19-9P-201ENST00000421795 191 ntBASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 TSACC-208ENST00000481479 741 ntTSL 2 BASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 AC005962.1-201ENST00000584100 773 ntBASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 AC027601.3-201ENST00000622907 509 ntBASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 AC068587.6-202ENST00000641839 5619 ntBASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBE3BQ7Z3V4 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 FAM58BP-201ENST00000439056 645 ntBASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 OARD1-204ENST00000464633 717 ntTSL 2 BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE3BQ7Z3V4 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms