Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
SCXQ7RTU7 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
SCXQ7RTU7 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC10.04□□□□□ -0.8
SCXQ7RTU7 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC10.04□□□□□ -0.8
SCXQ7RTU7 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC10.04□□□□□ -0.8
SCXQ7RTU7 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SCXQ7RTU7 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SCXQ7RTU7 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
SCXQ7RTU7 NSL1-201ENST00000366976 722 ntTSL 2 BASIC10.04□□□□□ -0.8
SCXQ7RTU7 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
SCXQ7RTU7 PKIG-203ENST00000372887 769 ntTSL 3 BASIC10.04□□□□□ -0.8
SCXQ7RTU7 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC10.04□□□□□ -0.8
SCXQ7RTU7 HIST1H2BPS3-201ENST00000419683 341 ntBASIC10.04□□□□□ -0.8
SCXQ7RTU7 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC10.04□□□□□ -0.8
SCXQ7RTU7 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC10.04□□□□□ -0.8
SCXQ7RTU7 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC10.04□□□□□ -0.8
SCXQ7RTU7 RPL13P2-201ENST00000440687 659 ntBASIC10.04□□□□□ -0.8
SCXQ7RTU7 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SCXQ7RTU7 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC10.04□□□□□ -0.8
SCXQ7RTU7 RN7SL399P-201ENST00000471648 279 ntBASIC10.04□□□□□ -0.8
SCXQ7RTU7 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC10.04□□□□□ -0.8
SCXQ7RTU7 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC10.04□□□□□ -0.8
SCXQ7RTU7 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC10.04□□□□□ -0.8
SCXQ7RTU7 PAM16-204ENST00000571941 674 ntTSL 3 BASIC10.04□□□□□ -0.8
SCXQ7RTU7 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
SCXQ7RTU7 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC10.04□□□□□ -0.8
SCXQ7RTU7 AC015936.2-201ENST00000593177 259 ntBASIC10.04□□□□□ -0.8
SCXQ7RTU7 AC008735.3-201ENST00000596646 500 ntBASIC10.04□□□□□ -0.8
SCXQ7RTU7 AC010319.3-201ENST00000597028 470 ntBASIC10.04□□□□□ -0.8
SCXQ7RTU7 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC10.04□□□□□ -0.8
SCXQ7RTU7 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
SCXQ7RTU7 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC10.04□□□□□ -0.8
SCXQ7RTU7 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
SCXQ7RTU7 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SCXQ7RTU7 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SCXQ7RTU7 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SCXQ7RTU7 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SCXQ7RTU7 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
SCXQ7RTU7 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SCXQ7RTU7 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SCXQ7RTU7 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SCXQ7RTU7 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SCXQ7RTU7 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
SCXQ7RTU7 CICP20-201ENST00000443330 2801 ntBASIC10.04□□□□□ -0.8
SCXQ7RTU7 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SCXQ7RTU7 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SCXQ7RTU7 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
SCXQ7RTU7 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SCXQ7RTU7 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
SCXQ7RTU7 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SCXQ7RTU7 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SCXQ7RTU7 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC10.04□□□□□ -0.8
SCXQ7RTU7 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC10.04□□□□□ -0.8
SCXQ7RTU7 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC10.04□□□□□ -0.8
SCXQ7RTU7 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SCXQ7RTU7 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SCXQ7RTU7 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC10.03□□□□□ -0.8
SCXQ7RTU7 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SCXQ7RTU7 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SCXQ7RTU7 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
SCXQ7RTU7 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC10.03□□□□□ -0.8
SCXQ7RTU7 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
SCXQ7RTU7 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC10.03□□□□□ -0.8
SCXQ7RTU7 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
SCXQ7RTU7 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SCXQ7RTU7 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC10.03□□□□□ -0.8
SCXQ7RTU7 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SCXQ7RTU7 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SCXQ7RTU7 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
SCXQ7RTU7 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SCXQ7RTU7 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
SCXQ7RTU7 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SCXQ7RTU7 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SCXQ7RTU7 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SCXQ7RTU7 AL137784.3-201ENST00000623858 2288 ntBASIC10.03□□□□□ -0.8
SCXQ7RTU7 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
SCXQ7RTU7 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC10.03□□□□□ -0.8
SCXQ7RTU7 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SCXQ7RTU7 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
SCXQ7RTU7 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SCXQ7RTU7 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
SCXQ7RTU7 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SCXQ7RTU7 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
SCXQ7RTU7 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
SCXQ7RTU7 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
SCXQ7RTU7 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
SCXQ7RTU7 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC10.03□□□□□ -0.8
SCXQ7RTU7 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
SCXQ7RTU7 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SCXQ7RTU7 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SCXQ7RTU7 HAUS4P1-201ENST00000406739 1145 ntBASIC10.03□□□□□ -0.8
SCXQ7RTU7 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC10.03□□□□□ -0.8
SCXQ7RTU7 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
SCXQ7RTU7 HLA-V-201ENST00000429037 534 ntBASIC10.03□□□□□ -0.8
SCXQ7RTU7 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
SCXQ7RTU7 TARDBPP1-201ENST00000442013 1203 ntBASIC10.03□□□□□ -0.8
SCXQ7RTU7 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
SCXQ7RTU7 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC10.03□□□□□ -0.8
SCXQ7RTU7 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC10.03□□□□□ -0.8
SCXQ7RTU7 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC10.03□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms