Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTF1AQ7RTS3 AL929302.1-201ENST00000426556 871 ntBASIC18.74■□□□□ 0.59
PTF1AQ7RTS3 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC18.74■□□□□ 0.59
PTF1AQ7RTS3 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC18.74■□□□□ 0.59
PTF1AQ7RTS3 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC18.74■□□□□ 0.59
PTF1AQ7RTS3 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC18.74■□□□□ 0.59
PTF1AQ7RTS3 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTF1AQ7RTS3 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC18.74■□□□□ 0.59
PTF1AQ7RTS3 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC18.74■□□□□ 0.59
PTF1AQ7RTS3 EMC4-208ENST00000559078 599 ntTSL 3 BASIC18.74■□□□□ 0.59
PTF1AQ7RTS3 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC18.74■□□□□ 0.59
PTF1AQ7RTS3 SIGLEC22P-201ENST00000599104 714 ntBASIC18.74■□□□□ 0.59
PTF1AQ7RTS3 AC008972.2-201ENST00000606587 494 ntBASIC18.74■□□□□ 0.59
PTF1AQ7RTS3 MIR6746-201ENST00000620971 63 ntBASIC18.74■□□□□ 0.59
PTF1AQ7RTS3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTF1AQ7RTS3 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
PTF1AQ7RTS3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.74■□□□□ 0.59
PTF1AQ7RTS3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTF1AQ7RTS3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.74■□□□□ 0.59
PTF1AQ7RTS3 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.74■□□□□ 0.59
PTF1AQ7RTS3 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTF1AQ7RTS3 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC18.74■□□□□ 0.59
PTF1AQ7RTS3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTF1AQ7RTS3 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.74■□□□□ 0.59
PTF1AQ7RTS3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTF1AQ7RTS3 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTF1AQ7RTS3 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTF1AQ7RTS3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTF1AQ7RTS3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PTF1AQ7RTS3 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.73■□□□□ 0.59
PTF1AQ7RTS3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTF1AQ7RTS3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.73■□□□□ 0.59
PTF1AQ7RTS3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PTF1AQ7RTS3 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PTF1AQ7RTS3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTF1AQ7RTS3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC18.73■□□□□ 0.59
PTF1AQ7RTS3 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTF1AQ7RTS3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTF1AQ7RTS3 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTF1AQ7RTS3 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTF1AQ7RTS3 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC18.73■□□□□ 0.59
PTF1AQ7RTS3 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PTF1AQ7RTS3 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC18.73■□□□□ 0.59
PTF1AQ7RTS3 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC18.73■□□□□ 0.59
PTF1AQ7RTS3 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC18.73■□□□□ 0.59
PTF1AQ7RTS3 OR2A1-AS1-210ENST00000496968 531 ntBASIC18.73■□□□□ 0.59
PTF1AQ7RTS3 RPS23-207ENST00000511844 530 ntTSL 2 BASIC18.73■□□□□ 0.59
PTF1AQ7RTS3 IGHV1-12-201ENST00000518307 205 ntBASIC18.73■□□□□ 0.59
PTF1AQ7RTS3 IGHVIII-5-2-201ENST00000522505 261 ntBASIC18.73■□□□□ 0.59
PTF1AQ7RTS3 NT5C-204ENST00000578337 582 ntTSL 2 BASIC18.73■□□□□ 0.59
PTF1AQ7RTS3 NAV1-210ENST00000593583 726 ntBASIC18.73■□□□□ 0.59
PTF1AQ7RTS3 AC021016.3-201ENST00000608367 477 ntBASIC18.73■□□□□ 0.59
PTF1AQ7RTS3 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC18.73■□□□□ 0.59
PTF1AQ7RTS3 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTF1AQ7RTS3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC18.73■□□□□ 0.59
PTF1AQ7RTS3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.73■□□□□ 0.59
PTF1AQ7RTS3 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.73■□□□□ 0.59
PTF1AQ7RTS3 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC18.73■□□□□ 0.59
PTF1AQ7RTS3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
PTF1AQ7RTS3 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
PTF1AQ7RTS3 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTF1AQ7RTS3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PTF1AQ7RTS3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC18.73■□□□□ 0.59
PTF1AQ7RTS3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTF1AQ7RTS3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTF1AQ7RTS3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTF1AQ7RTS3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.72■□□□□ 0.59
PTF1AQ7RTS3 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PTF1AQ7RTS3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.72■□□□□ 0.59
PTF1AQ7RTS3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTF1AQ7RTS3 AGGF1P1-201ENST00000509500 2073 ntBASIC18.72■□□□□ 0.59
PTF1AQ7RTS3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PTF1AQ7RTS3 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTF1AQ7RTS3 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTF1AQ7RTS3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTF1AQ7RTS3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTF1AQ7RTS3 AL591122.2-201ENST00000624125 1853 ntBASIC18.72■□□□□ 0.59
PTF1AQ7RTS3 CTSL-202ENST00000342020 933 ntTSL 2 BASIC18.72■□□□□ 0.59
PTF1AQ7RTS3 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTF1AQ7RTS3 OR51A9P-201ENST00000422578 911 ntBASIC18.72■□□□□ 0.59
PTF1AQ7RTS3 RNLS-203ENST00000437752 525 ntTSL 2 BASIC18.72■□□□□ 0.59
PTF1AQ7RTS3 HNRNPA1P42-201ENST00000458678 957 ntBASIC18.72■□□□□ 0.59
PTF1AQ7RTS3 AC013553.1-201ENST00000560906 267 ntBASIC18.72■□□□□ 0.59
PTF1AQ7RTS3 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC18.72■□□□□ 0.59
PTF1AQ7RTS3 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC18.72■□□□□ 0.59
PTF1AQ7RTS3 TP53-221ENST00000615910 1149 ntTSL 5 BASIC18.72■□□□□ 0.59
PTF1AQ7RTS3 ST5-261ENST00000626808 1071 ntTSL 5 BASIC18.72■□□□□ 0.59
PTF1AQ7RTS3 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PTF1AQ7RTS3 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC18.72■□□□□ 0.59
PTF1AQ7RTS3 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.72■□□□□ 0.59
PTF1AQ7RTS3 AC067931.2-201ENST00000623655 2003 ntBASIC18.72■□□□□ 0.59
PTF1AQ7RTS3 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTF1AQ7RTS3 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PTF1AQ7RTS3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.72■□□□□ 0.59
PTF1AQ7RTS3 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTF1AQ7RTS3 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTF1AQ7RTS3 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PTF1AQ7RTS3 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTF1AQ7RTS3 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTF1AQ7RTS3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms