Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 RPSAP52-203ENST00000622976 1023 ntBASIC12.21□□□□□ -0.45
CCDC144NLQ6NUI1 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
CCDC144NLQ6NUI1 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCDC144NLQ6NUI1 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCDC144NLQ6NUI1 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCDC144NLQ6NUI1 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.21□□□□□ -0.46
CCDC144NLQ6NUI1 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCDC144NLQ6NUI1 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCDC144NLQ6NUI1 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
CCDC144NLQ6NUI1 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCDC144NLQ6NUI1 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCDC144NLQ6NUI1 ACE3P-201ENST00000423435 1973 ntBASIC12.21□□□□□ -0.46
CCDC144NLQ6NUI1 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.21□□□□□ -0.46
CCDC144NLQ6NUI1 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCDC144NLQ6NUI1 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CCDC144NLQ6NUI1 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
CCDC144NLQ6NUI1 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.21□□□□□ -0.46
CCDC144NLQ6NUI1 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.21□□□□□ -0.46
CCDC144NLQ6NUI1 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CCDC144NLQ6NUI1 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCDC144NLQ6NUI1 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCDC144NLQ6NUI1 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 EIF3FP3-201ENST00000434851 1086 ntBASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 AC106760.1-201ENST00000508690 800 ntBASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 AC079316.1-201ENST00000548397 411 ntBASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 RAB43P1-201ENST00000561790 589 ntBASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 AC025279.2-201ENST00000569730 653 ntBASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCDC144NLQ6NUI1 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC144NLQ6NUI1 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.19□□□□□ -0.46
CCDC144NLQ6NUI1 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC12.19□□□□□ -0.46
CCDC144NLQ6NUI1 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.19□□□□□ -0.46
CCDC144NLQ6NUI1 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC144NLQ6NUI1 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC144NLQ6NUI1 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC144NLQ6NUI1 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.19□□□□□ -0.46
CCDC144NLQ6NUI1 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC144NLQ6NUI1 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.19□□□□□ -0.46
CCDC144NLQ6NUI1 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC144NLQ6NUI1 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC144NLQ6NUI1 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC144NLQ6NUI1 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC144NLQ6NUI1 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC144NLQ6NUI1 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CCDC144NLQ6NUI1 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.19□□□□□ -0.46
CCDC144NLQ6NUI1 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.19□□□□□ -0.46
CCDC144NLQ6NUI1 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC144NLQ6NUI1 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC144NLQ6NUI1 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC144NLQ6NUI1 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CCDC144NLQ6NUI1 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC144NLQ6NUI1 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms