Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 GGTLC4P-201ENST00000402176 664 ntBASIC14.26□□□□□ -0.13
RIF1Q5UIP0 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 CDK4P1-201ENST00000454213 828 ntBASIC14.26□□□□□ -0.13
RIF1Q5UIP0 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 GPX3-202ENST00000517973 612 ntTSL 3 BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RIF1Q5UIP0 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 SCARNA12-201ENST00000459155 270 ntBASIC14.25□□□□□ -0.13
RIF1Q5UIP0 TMA16-204ENST00000508268 608 ntTSL 2 BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 CADM1-221ENST00000612235 1042 ntTSL 5 BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 SNORA57-201ENST00000383870 149 ntBASIC14.25□□□□□ -0.13
RIF1Q5UIP0 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 AL121949.3-201ENST00000406684 385 ntBASIC14.25□□□□□ -0.13
RIF1Q5UIP0 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 AC006328.1-201ENST00000437571 379 ntBASIC14.25□□□□□ -0.13
RIF1Q5UIP0 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 RPS23-207ENST00000511844 530 ntTSL 2 BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 CICP11-201ENST00000434745 2827 ntBASIC14.25□□□□□ -0.13
RIF1Q5UIP0 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 DBET-201ENST00000630918 3363 ntBASIC14.25□□□□□ -0.13
RIF1Q5UIP0 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RIF1Q5UIP0 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 MIR648-201ENST00000385046 94 ntBASIC14.24□□□□□ -0.13
RIF1Q5UIP0 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 AC098934.1-203ENST00000442868 1262 ntBASIC14.24□□□□□ -0.13
RIF1Q5UIP0 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 RN7SL665P-201ENST00000578793 300 ntBASIC14.24□□□□□ -0.13
RIF1Q5UIP0 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RIF1Q5UIP0 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms