Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC13.44□□□□□ -0.26
RNFT1Q5M7Z0 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RNFT1Q5M7Z0 AL805961.1-203ENST00000641078 1258 ntBASIC13.44□□□□□ -0.26
RNFT1Q5M7Z0 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RNFT1Q5M7Z0 AC138035.3-201ENST00000622706 2791 ntBASIC13.44□□□□□ -0.26
RNFT1Q5M7Z0 MBLAC2-202ENST00000514906 1936 ntBASIC13.44□□□□□ -0.26
RNFT1Q5M7Z0 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.44□□□□□ -0.26
RNFT1Q5M7Z0 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RNFT1Q5M7Z0 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RNFT1Q5M7Z0 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.44□□□□□ -0.26
RNFT1Q5M7Z0 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RNFT1Q5M7Z0 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RNFT1Q5M7Z0 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RNFT1Q5M7Z0 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RNFT1Q5M7Z0 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.44□□□□□ -0.26
RNFT1Q5M7Z0 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.44□□□□□ -0.26
RNFT1Q5M7Z0 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RNFT1Q5M7Z0 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
RNFT1Q5M7Z0 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RNFT1Q5M7Z0 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RNFT1Q5M7Z0 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RNFT1Q5M7Z0 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RNFT1Q5M7Z0 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 KRT8P19-201ENST00000551916 1455 ntBASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 AC091046.1-201ENST00000331871 207 ntBASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 AL008707.1-201ENST00000422498 534 ntBASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 Z97180.1-201ENST00000445173 988 ntBASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 HLA-J-204ENST00000495278 958 ntBASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 AC125604.1-201ENST00000496255 707 ntBASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 AC024681.1-201ENST00000521917 487 ntBASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 FOS-206ENST00000555347 1280 ntTSL 2 BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 ADAM3B-201ENST00000569937 840 ntBASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 AC100757.4-201ENST00000626934 759 ntBASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RNFT1Q5M7Z0 AC091951.1-201ENST00000512854 2465 ntBASIC13.42□□□□□ -0.26
RNFT1Q5M7Z0 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNFT1Q5M7Z0 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
RNFT1Q5M7Z0 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
RNFT1Q5M7Z0 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.42□□□□□ -0.26
RNFT1Q5M7Z0 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RNFT1Q5M7Z0 AL008718.2-201ENST00000609206 1313 ntBASIC13.42□□□□□ -0.26
RNFT1Q5M7Z0 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNFT1Q5M7Z0 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.42□□□□□ -0.26
RNFT1Q5M7Z0 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNFT1Q5M7Z0 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
RNFT1Q5M7Z0 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNFT1Q5M7Z0 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNFT1Q5M7Z0 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RNFT1Q5M7Z0 AC007292.2-201ENST00000593524 1812 ntBASIC13.42□□□□□ -0.26
RNFT1Q5M7Z0 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNFT1Q5M7Z0 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNFT1Q5M7Z0 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms