Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 AL162726.2-201ENST00000438986 1017 ntBASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 AP001582.1-201ENST00000525856 295 ntBASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 AC093813.1-201ENST00000605066 256 ntBASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KHDC1Q4VXA5 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
KHDC1Q4VXA5 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 AC093525.8-201ENST00000624099 1342 ntBASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
KHDC1Q4VXA5 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms