Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 BX640514.1-201ENST00000583223 1918 ntBASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 PDIA3P1-201ENST00000471856 1510 ntBASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 AC079776.1-201ENST00000401540 1152 ntBASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 RN7SKP175-201ENST00000408472 289 ntBASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 ARSEP1-201ENST00000420443 635 ntBASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 AC005034.1-201ENST00000426657 489 ntBASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 KRT43P-201ENST00000434019 910 ntBASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 AC022447.6-201ENST00000515522 438 ntBASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 AL035252.4-201ENST00000624174 288 ntBASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 AP000593.2-201ENST00000542775 1433 ntBASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 AL136172.1-201ENST00000598590 1394 ntBASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 PCDHA3-202ENST00000532566 4594 ntBASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 AC092135.3-201ENST00000624151 1846 ntBASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTPN20Q4JDL3 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 AC026748.1-201ENST00000624349 3251 ntBASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 AC106886.1-201ENST00000568660 600 ntBASIC15.72■□□□□ 0.11
PTPN20Q4JDL3 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms