Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
EFNB3Q15768 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
EFNB3Q15768 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.77□□□□□ -0.37
EFNB3Q15768 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.77□□□□□ -0.37
EFNB3Q15768 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
EFNB3Q15768 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
EFNB3Q15768 RN7SKP230-201ENST00000365642 335 ntBASIC12.77□□□□□ -0.37
EFNB3Q15768 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
EFNB3Q15768 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.77□□□□□ -0.37
EFNB3Q15768 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.77□□□□□ -0.37
EFNB3Q15768 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC12.77□□□□□ -0.37
EFNB3Q15768 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC12.77□□□□□ -0.37
EFNB3Q15768 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
EFNB3Q15768 AC099548.2-209ENST00000480264 625 ntBASIC12.77□□□□□ -0.37
EFNB3Q15768 AC091804.1-201ENST00000486888 567 ntBASIC12.77□□□□□ -0.37
EFNB3Q15768 AC100850.1-201ENST00000506768 649 ntBASIC12.77□□□□□ -0.37
EFNB3Q15768 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC12.77□□□□□ -0.37
EFNB3Q15768 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
EFNB3Q15768 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.77□□□□□ -0.37
EFNB3Q15768 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
EFNB3Q15768 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.77□□□□□ -0.37
EFNB3Q15768 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC12.77□□□□□ -0.37
EFNB3Q15768 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.77□□□□□ -0.37
EFNB3Q15768 AC008825.2-201ENST00000603374 718 ntBASIC12.77□□□□□ -0.37
EFNB3Q15768 GPR182-203ENST00000622922 591 ntBASIC12.77□□□□□ -0.37
EFNB3Q15768 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.77□□□□□ -0.37
EFNB3Q15768 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC12.77□□□□□ -0.37
EFNB3Q15768 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
EFNB3Q15768 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
EFNB3Q15768 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
EFNB3Q15768 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
EFNB3Q15768 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
EFNB3Q15768 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
EFNB3Q15768 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
EFNB3Q15768 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
EFNB3Q15768 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
EFNB3Q15768 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.77□□□□□ -0.37
EFNB3Q15768 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC12.77□□□□□ -0.37
EFNB3Q15768 AC011840.2-201ENST00000563063 1520 ntBASIC12.77□□□□□ -0.37
EFNB3Q15768 AL133338.1-201ENST00000565695 1517 ntBASIC12.77□□□□□ -0.37
EFNB3Q15768 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
EFNB3Q15768 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
EFNB3Q15768 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC12.77□□□□□ -0.37
EFNB3Q15768 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.76□□□□□ -0.37
EFNB3Q15768 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB3Q15768 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB3Q15768 AL009178.2-201ENST00000597278 2719 ntBASIC12.76□□□□□ -0.37
EFNB3Q15768 AC138035.3-201ENST00000622706 2791 ntBASIC12.76□□□□□ -0.37
EFNB3Q15768 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB3Q15768 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB3Q15768 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC12.76□□□□□ -0.37
EFNB3Q15768 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
EFNB3Q15768 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB3Q15768 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.76□□□□□ -0.37
EFNB3Q15768 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.76□□□□□ -0.37
EFNB3Q15768 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
EFNB3Q15768 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.76□□□□□ -0.37
EFNB3Q15768 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB3Q15768 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.76□□□□□ -0.37
EFNB3Q15768 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.76□□□□□ -0.37
EFNB3Q15768 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.76□□□□□ -0.37
EFNB3Q15768 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB3Q15768 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB3Q15768 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB3Q15768 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB3Q15768 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB3Q15768 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB3Q15768 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB3Q15768 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB3Q15768 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
EFNB3Q15768 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB3Q15768 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB3Q15768 ARTN-209ENST00000479128 471 ntTSL 3 BASIC12.76□□□□□ -0.37
EFNB3Q15768 ALG3P1-201ENST00000508806 1114 ntBASIC12.76□□□□□ -0.37
EFNB3Q15768 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC12.76□□□□□ -0.37
EFNB3Q15768 AC126915.1-201ENST00000522847 1038 ntBASIC12.76□□□□□ -0.37
EFNB3Q15768 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB3Q15768 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB3Q15768 AL358472.3-201ENST00000608147 415 ntBASIC12.76□□□□□ -0.37
EFNB3Q15768 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.76□□□□□ -0.37
EFNB3Q15768 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB3Q15768 AC244452.3-201ENST00000636814 210 ntBASIC12.76□□□□□ -0.37
EFNB3Q15768 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB3Q15768 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB3Q15768 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB3Q15768 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB3Q15768 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB3Q15768 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB3Q15768 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB3Q15768 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB3Q15768 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB3Q15768 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB3Q15768 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB3Q15768 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB3Q15768 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB3Q15768 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB3Q15768 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
EFNB3Q15768 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB3Q15768 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
EFNB3Q15768 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms