Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL16A1Q07092 AC090616.6-203ENST00000579186 1945 ntBASIC19.38■□□□□ 0.69
COL16A1Q07092 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
COL16A1Q07092 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL16A1Q07092 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL16A1Q07092 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC19.38■□□□□ 0.69
COL16A1Q07092 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL16A1Q07092 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL16A1Q07092 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC19.38■□□□□ 0.69
COL16A1Q07092 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC19.38■□□□□ 0.69
COL16A1Q07092 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL16A1Q07092 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL16A1Q07092 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL16A1Q07092 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL16A1Q07092 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC19.38■□□□□ 0.69
COL16A1Q07092 AC005740.1-201ENST00000515639 522 ntBASIC19.38■□□□□ 0.69
COL16A1Q07092 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC19.38■□□□□ 0.69
COL16A1Q07092 AC140658.4-201ENST00000561990 352 ntBASIC19.38■□□□□ 0.69
COL16A1Q07092 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL16A1Q07092 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL16A1Q07092 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL16A1Q07092 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL16A1Q07092 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL16A1Q07092 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL16A1Q07092 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC19.38■□□□□ 0.69
COL16A1Q07092 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL16A1Q07092 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL16A1Q07092 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.38■□□□□ 0.69
COL16A1Q07092 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL16A1Q07092 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
COL16A1Q07092 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL16A1Q07092 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL16A1Q07092 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC19.38■□□□□ 0.69
COL16A1Q07092 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC19.38■□□□□ 0.69
COL16A1Q07092 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC19.38■□□□□ 0.69
COL16A1Q07092 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL16A1Q07092 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL16A1Q07092 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
COL16A1Q07092 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC19.37■□□□□ 0.69
COL16A1Q07092 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL16A1Q07092 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC19.37■□□□□ 0.69
COL16A1Q07092 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL16A1Q07092 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
COL16A1Q07092 AC006987.1-201ENST00000413610 527 ntBASIC19.37■□□□□ 0.69
COL16A1Q07092 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC19.37■□□□□ 0.69
COL16A1Q07092 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC19.37■□□□□ 0.69
COL16A1Q07092 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC19.37■□□□□ 0.69
COL16A1Q07092 NALT1-202ENST00000450304 437 ntTSL 3 BASIC19.37■□□□□ 0.69
COL16A1Q07092 RN7SL523P-201ENST00000484401 298 ntBASIC19.37■□□□□ 0.69
COL16A1Q07092 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC19.37■□□□□ 0.69
COL16A1Q07092 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC19.37■□□□□ 0.69
COL16A1Q07092 AC005777.1-201ENST00000588332 187 ntBASIC19.37■□□□□ 0.69
COL16A1Q07092 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC19.37■□□□□ 0.69
COL16A1Q07092 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
COL16A1Q07092 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC19.37■□□□□ 0.69
COL16A1Q07092 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
COL16A1Q07092 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL16A1Q07092 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL16A1Q07092 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL16A1Q07092 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL16A1Q07092 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL16A1Q07092 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL16A1Q07092 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC19.37■□□□□ 0.69
COL16A1Q07092 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC19.36■□□□□ 0.69
COL16A1Q07092 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL16A1Q07092 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC19.36■□□□□ 0.69
COL16A1Q07092 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC19.36■□□□□ 0.69
COL16A1Q07092 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
COL16A1Q07092 BX679664.3-201ENST00000414070 555 ntBASIC19.36■□□□□ 0.69
COL16A1Q07092 AC133141.1-201ENST00000443015 339 ntBASIC19.36■□□□□ 0.69
COL16A1Q07092 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC19.36■□□□□ 0.69
COL16A1Q07092 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC19.36■□□□□ 0.69
COL16A1Q07092 AC113935.1-201ENST00000471722 555 ntBASIC19.36■□□□□ 0.69
COL16A1Q07092 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
COL16A1Q07092 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC19.36■□□□□ 0.69
COL16A1Q07092 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC19.36■□□□□ 0.69
COL16A1Q07092 BATF-202ENST00000555504 361 ntTSL 2 BASIC19.36■□□□□ 0.69
COL16A1Q07092 AC120498.5-201ENST00000561757 299 ntBASIC19.36■□□□□ 0.69
COL16A1Q07092 SKA2-205ENST00000580541 689 ntTSL 3 BASIC19.36■□□□□ 0.69
COL16A1Q07092 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC19.36■□□□□ 0.69
COL16A1Q07092 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL16A1Q07092 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC19.36■□□□□ 0.69
COL16A1Q07092 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL16A1Q07092 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC19.36■□□□□ 0.69
COL16A1Q07092 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC19.36■□□□□ 0.69
COL16A1Q07092 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC19.36■□□□□ 0.69
COL16A1Q07092 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL16A1Q07092 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
COL16A1Q07092 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.36■□□□□ 0.69
COL16A1Q07092 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL16A1Q07092 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC19.36■□□□□ 0.69
COL16A1Q07092 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL16A1Q07092 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.36■□□□□ 0.69
COL16A1Q07092 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
COL16A1Q07092 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL16A1Q07092 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC19.36■□□□□ 0.69
COL16A1Q07092 RN7SL69P-201ENST00000468423 272 ntBASIC19.36■□□□□ 0.69
COL16A1Q07092 RN7SL351P-201ENST00000469306 248 ntBASIC19.36■□□□□ 0.69
COL16A1Q07092 ISL1-203ENST00000511384 981 ntTSL 5 BASIC19.36■□□□□ 0.69
COL16A1Q07092 AL359219.1-201ENST00000556311 934 ntBASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms